Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01644 ATGCCTTCTTCTGCTTCTGCACCTACCTTGCTCTCCAAATGCACTGTCTTCCCAGACCAAAGCTCCACTCTGGGAAACCTCAAACTCTCCGTTTCGGACCTTCCCATGTTGTCCTGCCACTACATCCAAAAGGGATGCCTCTTTACCCAACCCAATATCCCACTTCACTCTTTAATTCCTCTTCTTAAATCCGCACTCTCTCGCGCGCTTTCTCTCTTTCCACCTCTCGCTGGCCGTTTAACCACTGATTCCCACGGTTACGTTTACCTTGCCTGCAACGACGCCGGCGTCGATTTCATACACGCCAATGCCACCGCCCTCCGCATCCGCGACCTACTGTCTCCACTCGACGTCCCTGAATACTTCAAGGAGTTCTTCGCATTCGATAGGAAAGTCAGCTACACCGGTCATTACTCCCCTATTCTCGCCGTTCAGGTCACTGAACTCGCTGACGGCCTATTCATCGGCTGCGCCGTCAATCACGCCGTCACCGATGGCACTTCCTTCTGGAACTTCTTCAACACCTTCGCCCAGCTCTGCAGAGGAGCTAATAAAAGCATTCGCAATGTACCGGACTTCCACCGCGACTCCGTTTTGATCTCCGACGCCGTCCTCCGCCTGCCGGAAGGCGGTCCTCAGGTTACATTCGATTCTCACGCGCCCCTCCGCGAGAGAATCTTCAGCTTCAGTCGCGAAGCAATTCAGAAACTGAAGGCCAAGACGAACAACCGTCGATGGCCGGAGAACAACATCACGGCGGTCGAGTTGATGGGGAAGCAAAGCAACGATCAATTTCCTCACGCGAAGGAGAACAACGGGAAGGCCGGCACGATTCTCGAGAACTGGTTTAAGTTGAACTCGAATTCGAAAACGCAAACGGCGGAGATTTCGTCGTTTCAATCAGTGTGCGCGTTGCTGTGGCGCGCGGTTACGCGCGCGAGGAAATTGCCTTCGTCCAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGTCACCGAATTGAACCAAAATTGGAACCGTACTACTTCGGGAACGCGATTCAGAGCGTGCCAACGTATGCTTCAGCCGGTGACGTGTTATCTAGGGATCTACGGTGGTGTGCGGAGCAGCTGAACAAAAACGTGAAGGCGCACGACGACGCTATGGTGCGGCGCTTCGTAGACGATTGGGAGCAGAACCCCAGGTGCTTCCCTCTTGGGAACCCTGATGGTGCATCCATCACTATGGGTAGTTCTCCACGGTTTCCAATGTACGATAACAACTTCGGGTGGGGGAGGCCTCTTGCGGTGAGAAGTGGAAGAGCGAACAAATTCGACGGCAAGATCTCGGCGTTTCCCGGAAGAGATGGAACAGGGACGGTGGATTTGGAGGTTGTTCTAGCGCCCGAAACCATGGAAGCGCTGGAATCTGATCCAGAATTCACGAAATATGCAACGTGTCAGTGTTGA 1449 0.5355 MPSSASAPTLLSKCTVFPDQSSTLGNLKLSVSDLPMLSCHYIQKGCLFTQPNIPLHSLIPLLKSALSRALSLFPPLAGRLTTDSHGYVYLACNDAGVDFIHANATALRIRDLLSPLDVPEYFKEFFAFDRKVSYTGHYSPILAVQVTELADGLFIGCAVNHAVTDGTSFWNFFNTFAQLCRGANKSIRNVPDFHRDSVLISDAVLRLPEGGPQVTFDSHAPLRERIFSFSREAIQKLKAKTNNRRWPENNITAVELMGKQSNDQFPHAKENNGKAGTILENWFKLNSNSKTQTAEISSFQSVCALLWRAVTRARKLPSSKTTTFRMAVNCRHRIEPKLEPYYFGNAIQSVPTYASAGDVLSRDLRWCAEQLNKNVKAHDDAMVRRFVDDWEQNPRCFPLGNPDGASITMGSSPRFPMYDNNFGWGRPLAVRSGRANKFDGKISAFPGRDGTGTVDLEVVLAPETMEALESDPEFTKYATCQC* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01644 482 Gene3D - 221 473 IPR023213 -
Lapu8g01644 482 SUPERFAMILY CoA-dependent acyltransferases 37 183 - -
Lapu8g01644 482 Gene3D - 9 206 IPR023213 -
Lapu8g01644 482 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 474 - -
Lapu8g01644 482 Pfam Transferase family 10 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01644 Lapu-Chr8 33440459 33442387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01644 61 469 Monolignol Biosynthesis Gene Families AT5G48930 27.685 7.03e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01644 - - gmx:100500612 852.047