Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01643 ATGGACGAGGGCATGTCAGGCTTTTGCATCAGATCAGGAAGTGTCCGTGGTAAAAGTGGGGGCACTAATTCTTCTGCCACTGGCACCAAGTGTGGTCGTTGGAATCCCACCACTGAACAGGTTAAACTTCTTACTGAACTCTTCAGGTCAGGGCTCCGCACCCCAAGCACTGACCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATAGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAGGCCAGGGAAAGACAGAAGCGCCGCAAGGTCTCCTTTGATGACAAGGATGTCATTCGTAGACAAAACTCCTTCAATACTTCTACACAAGGTCTTGCTGATATGCATCGAGTTTCAGAGCCAGATAGGGTGCTTGAGACTCTTCAACTCTTTCCCTTAAACTCCTTCGGTGAATCTGAACCAGAGAACCTGAGGTTACATGCAAATGAATGTAGGGATAGTAGTACAATGTTTTCATACACGATGGATGAACAAATAGAGCACCCACCATTGGACCTGCGCTTGAGTTTTCTGTAA 552 0.4583 MDEGMSGFCIRSGSVRGKSGGTNSSATGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDKDVIRRQNSFNTSTQGLADMHRVSEPDRVLETLQLFPLNSFGESEPENLRLHANECRDSSTMFSYTMDEQIEHPPLDLRLSFL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01643 183 Pfam Homeodomain 31 91 IPR001356 GO:0003677
Lapu8g01643 183 CDD homeodomain 33 93 IPR001356 GO:0003677
Lapu8g01643 183 Gene3D - 30 98 - -
Lapu8g01643 183 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 108 IPR044555 GO:0003700|GO:0099402
Lapu8g01643 183 FunFam WUSCHEL-related homeobox 11 30 98 - -
Lapu8g01643 183 MobiDBLite consensus disorder prediction 12 32 - -
Lapu8g01643 183 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Lapu8g01643 183 MobiDBLite consensus disorder prediction 16 32 - -
Lapu8g01643 183 SUPERFAMILY Homeodomain-like 32 94 IPR009057 -
Lapu8g01643 183 SMART HOX_1 29 96 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01643 Lapu-Chr8 33427460 33428168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01643 12 183 Wox Gene Family AT3G11260 56.614 7.02e-60 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu8g01643 Homeodomain 6.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01643 - - pvu:PHAVU_008G226100g 350.903