Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01632 ATGGCTTCCTCTTACCGTGACCGCACGTCGGAGTTCCGGTTACTGTCGGAGACTCTGAAGAAGATTGGAGCAGGGACCTCGCCTTCGGTTCAACCCGATAATGCTCCTTCCACCTCTCACGATTCCTATTCAAGATCCGAATTCAACCGAAAGGCCTCACGAATCGGGTTGGGGATCCACGAAACATCGCAGAAGGTGGCGAGGCTCGCGCAGCTGGCGAGGAAATCGTCCATGTTCAACGATCCGGCTGTGGAGATTCAGGAGCTGACTGCGCTGATTAAGAACGAGATCACGGCGCTGAATTCGGCTATCTCCGATTTGCAAGCCATTCAGAACATGGACATGGCTGACGGAAGTTACTCGCAGGATAGGATTGTGCATTCAACCGCCGTCTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACGAAGCACCTTCAAGATGTTTTAACTGCTAGGACAGAGAATATCAAGGCTCACGAGAGCAGGAAGCAGATATTTTCCAAGAATGCATCAAGAGAGAACGCTTTCCAGCATCAATCAAAGCCAGCTACTGAGCCGCCACCTTGGTCAAATTCGTTGAATGCATCTGAGAATCTGCAACAGGAGTCGGCATTACCATCAAATGGAGCTCCTGTTAGCAATCAACTAAGACGAAGGTTGGCTGTGGACAACACTCCATCTCAGCAAATGGAAATGTCTATGGTTCAGCAGGTTGTTCCTCGGCAAGAAAACTACACTCAAAGTAGGTCAACTGCTCTGCACAATGTGGAATCTACTATCACAGAACTTAGTGGAATTTTCTCACATTTGGCTACAATGGTTGCCCATCAAGGGGAGCTTGCTATCAGGATTGATGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGAATCTCAACCGAATATCATCAAATAGGTGGCTTCTAATAAAGATATTTGCCGTTCTGATACTTTTCCTCCTGATCTTCATATTCTTTGTGGCCTAA 1011 0.4738 MASSYRDRTSEFRLLSETLKKIGAGTSPSVQPDNAPSTSHDSYSRSEFNRKASRIGLGIHETSQKVARLAQLARKSSMFNDPAVEIQELTALIKNEITALNSAISDLQAIQNMDMADGSYSQDRIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHESRKQIFSKNASRENAFQHQSKPATEPPPWSNSLNASENLQQESALPSNGAPVSNQLRRRLAVDNTPSQQMEMSMVQQVVPRQENYTQSRSTALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRNLNRISSNRWLLIKIFAVLILFLLIFIFFVA* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01632 336 Gene3D - 41 299 - -
Lapu8g01632 336 Pfam SNARE domain 281 332 IPR000727 -
Lapu8g01632 336 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 244 306 IPR000727 -
Lapu8g01632 336 MobiDBLite consensus disorder prediction 169 214 - -
Lapu8g01632 336 CDD SNARE_syntaxin5 248 323 - -
Lapu8g01632 336 MobiDBLite consensus disorder prediction 23 43 - -
Lapu8g01632 336 SUPERFAMILY t-snare proteins 44 299 IPR010989 GO:0016020|GO:0016192
Lapu8g01632 336 SMART tSNARE_6 239 306 IPR000727 -
Lapu8g01632 336 MobiDBLite consensus disorder prediction 160 214 - -
Lapu8g01632 336 MobiDBLite consensus disorder prediction 23 47 - -
Lapu8g01632 336 ProSitePatterns Syntaxin / epimorphin family signature. 250 289 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lapu8g01632 336 PANTHER SYNTAXIN 46 331 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01632 Lapu-Chr8 33361172 33366795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01632 1 336 SNARE and Associated Proteins AT5G05760 65.976 9.37e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01632 K08490 - gmx:100777383 535.798