Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01628 ATGGCTCTAACTGTAGTAATGATTCTTCTCAGTCTTGTTTCACAAACCTTGGTGTACATGACACCAGCTACGTTTGCTCATGTTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATAAGCTTACCAATGGAGTGCCTAATGCTCTTCCATCATGGAACAACTCTTTGCATTTCTGTGAGTGGCCGGGTGTTACATGCGGACATCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATCAGAACTGGAATGGTACTCTTGGACCATCCTTGGCAAATCTAACCTTCCTCAGAGGCCTCATTCTTTCCAATATCAACTTGCATGGTGAAATCCCCACACAAATTGGTCGACTAAAGAGGTTGCAGGTTCTTGACTTGAGCCACAACAATCTAAATGGTCAGATTCCTGTACACCTTTCTAACTGCTCTAAACTTGAGACGATTAACTTGTTGTACAATAAACTCACTGGAAAAGTTCCCTCCTGGTTTGGAATTGGATCCATGACACGGCTTAATAAGCTGCTTCTTGGTGCCAATGATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCATTCATCCCTTCAATATATCACAGTTGCAAGAAATCATTTGGTGGGAAGCATACCACATGTTTTGGGTCGTTTATCAAATTTGAAAGAGCTGAATCTTGGTTTAAATAATTTGTCTGGAGTAGTGCCTGATTCTCTTTATAACCTTTCCAATATTCAAATTTTTGTTCTCGGGGAAAACCAGTTATCTGGTACTCTTCCATCAAAAATGCAACTTGCGTTTCCAAATCTTCGAGCATTCTTTGTTGGAGGGAACCAGTTCAGTGGAACTTTCCCGTCTTCAATATCCAATATCACCGGATTACAAGCGTTTGATATCTCCTCAAATGGTTTTAGTGGGCCAATTCCTTCTACTTTTGGAAGCTTAAACAAACTCGAGAAGTTTAGCATTTCTCTTAACAGTTTTGGAAGTGGGAGAGCTCAAGATTTAGATTTCCTTTCCTCTTTAACCAATTGTACTCAATTGAACACACTTCTTTTGGGTTGGAATGAATTTGGTGGTGTGTTGCCAGATCTTATTGGTAATTTTTCTACCAATCTCTCTTTGCTCAGTATGCAGTTTAATCAAATATCTGGAGTGATACCTGAAGCAATTGGACAGCTGATCGGTTTAACTGAGATCGACATGATAGATAATTATCTGGAGGGAACTATTCCAGATTCCATTGGAAAGCTTAAAAATCTAGTAAGATTGTCCCTGCAAGAAAACAAGTTGTCTGGTAATATTCCTACAGCCATTGGTAATCTTACTATGTTGTCTGAACTTTATCTGCACACCAATAAATTCAAAGGAAGCATTCCATTAAGCCTCAAACACTGCACACGCATGCAGTCTTTTGGAGTTTCCAGCAATAACTTAAGTGGTGATATTCCTAGCCAAATATTTGGCAATCTAGAAGGTTTGATACGGCTTGACTTATCCAACAACTCTTTCACTGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCATATTATATCTAAACGAAAACAAGTTGTCCGGTGAAATTCCCCTAGAGCTTGGAGCTTGTTCCGGATTAACAGAACTCATGCTGCAGATAAACTTCTTCCAGGGAAGCATACCTTCGTTCTTGGTCTCTTTAGGATCCCTTGAATTCCTAGACCTTTCCAACAACAACTTCTCAAGCACAATCCCTGTTGAACTACAAAAGTTGAGCTATTTGAATACTTTGAACTTGTCTTTTAATCATCTTTATGGTGAGGTTCCTATAGGAGGCGTCTTTGATAATGTTACAGCAATTTCACTCATTGGAAATAAGGATCTCTGTGGGGGGATACCTCAACTGAAGCTCCCTGCATGCTCTATGTTGCCCTCAAAGAAACACAAGTGGTCTTTTAGAAAGAAACTCATCCTCATCATTGCAATTGTTGTTGGAGTGGGTTTGGTTACTTTGACACTGTTTATCATCATCTATTTGTTCAGGAAAAGGCCAAAAACATCATCGACTTCATGGTCTCCGAAAAATAGGTACGTGAAGGTTTCTTATGGAGAGCTGCATAAAGCAACCAATGGATTTTCTTCATACAATTTGGTAGGGTCTGGAAGCTATGGTTGTGTATATAGTGGATCTCTTCTCCCTTTCAAAAGACCTATTGCTGTGAAGGTATTGAATCTTGAAAAAGGTGGGGCATCAAAGAGTTTCGCAGCTGAGTGCAAGGCTCTAGGAAGGATCATGCATCGGAATCTTCTCAATATCTTGACTTGTTGTTCAAGTATTGATTATAATGGGAAAGATTTCAAGGCTATAGTTTTTGAGTTCATGCCTAATGGCAGTCTAGAAAGTTTGCTGCACAACAACCAAGAGCTGGAGTCTAGAAATTTCTGTCTCAACCTTGAACTCATGCTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCATCATGGTTCTGAGGAAGCTGTAGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCCCACTTGGGAGATTTTGGGTTAGCAAGGCTCCTTCATGTGGTCACGGGACATTCCAGCAGAGATCAGGTTAGTTCTTCTGCAATTAGAGGAACCATCGGATATGTTCCACCAGAGTACGGAACAGGTTGCAGAGTATCAGCAAAAGGAGATATGTACAGCTACGGAATTCTCGTGCTGGAGATGCTTACACGAAAGAAACCAACTGATGAGATGTTTGGAGAAAGTCTAAGCCTGCATAAATTCTGCCAAATGGCAATTCCAGAAGGAATCACTGAGATAGTAGATTCACGTTTGCTTGTGGCAACTACTGAAGAAGGAAGAAGGGTGATGGAAACCAGAATTAGGGATTGTTTGGTGAGCGTTGCAAGGATTGGAGTAGCATGTTCTGCAGAGTTGCCTGTTGAGAGAATGGACATAAAAGATGTGGTATTGGAGTTGCACGCAATCAAACAGAAACTGTCTCAGTAG 3045 0.4059 MALTVVMILLSLVSQTLVYMTPATFAHVLSSESDKLALLALKHKLTNGVPNALPSWNNSLHFCEWPGVTCGHRHMRVSVLHLENQNWNGTLGPSLANLTFLRGLILSNINLHGEIPTQIGRLKRLQVLDLSHNNLNGQIPVHLSNCSKLETINLLYNKLTGKVPSWFGIGSMTRLNKLLLGANDLVGTIPPSLGNHSSLQYITVARNHLVGSIPHVLGRLSNLKELNLGLNNLSGVVPDSLYNLSNIQIFVLGENQLSGTLPSKMQLAFPNLRAFFVGGNQFSGTFPSSISNITGLQAFDISSNGFSGPIPSTFGSLNKLEKFSISLNSFGSGRAQDLDFLSSLTNCTQLNTLLLGWNEFGGVLPDLIGNFSTNLSLLSMQFNQISGVIPEAIGQLIGLTEIDMIDNYLEGTIPDSIGKLKNLVRLSLQENKLSGNIPTAIGNLTMLSELYLHTNKFKGSIPLSLKHCTRMQSFGVSSNNLSGDIPSQIFGNLEGLIRLDLSNNSFTGSIPLEFGNLKHLSILYLNENKLSGEIPLELGACSGLTELMLQINFFQGSIPSFLVSLGSLEFLDLSNNNFSSTIPVELQKLSYLNTLNLSFNHLYGEVPIGGVFDNVTAISLIGNKDLCGGIPQLKLPACSMLPSKKHKWSFRKKLILIIAIVVGVGLVTLTLFIIIYLFRKRPKTSSTSWSPKNRYVKVSYGELHKATNGFSSYNLVGSGSYGCVYSGSLLPFKRPIAVKVLNLEKGGASKSFAAECKALGRIMHRNLLNILTCCSSIDYNGKDFKAIVFEFMPNGSLESLLHNNQELESRNFCLNLELMLNIALDVANALDYLHHGSEEAVVHCDIKPSNVLLDDDIVAHLGDFGLARLLHVVTGHSSRDQVSSSAIRGTIGYVPPEYGTGCRVSAKGDMYSYGILVLEMLTRKKPTDEMFGESLSLHKFCQMAIPEGITEIVDSRLLVATTEEGRRVMETRIRDCLVSVARIGVACSAELPVERMDIKDVVLELHAIKQKLSQ* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01628 1014 Gene3D Ribonuclease Inhibitor 170 337 IPR032675 -
Lapu8g01628 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 271 1006 - -
Lapu8g01628 1014 SMART serkin_6 710 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01628 1014 Pfam Protein kinase domain 713 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01628 1014 Pfam Leucine rich repeat 471 530 IPR001611 GO:0005515
Lapu8g01628 1014 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Lapu8g01628 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 339 644 - -
Lapu8g01628 1014 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lapu8g01628 1014 Gene3D Phosphorylase Kinase; domain 1 691 791 - -
Lapu8g01628 1014 ProSiteProfiles Protein kinase domain profile. 710 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01628 1014 Coils Coil 1005 1014 - -
Lapu8g01628 1014 SUPERFAMILY RNI-like 270 607 - -
Lapu8g01628 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 792 1014 - -
Lapu8g01628 1014 ProSiteProfiles Leucine-rich repeat profile. 567 588 IPR001611 GO:0005515
Lapu8g01628 1014 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Lapu8g01628 1014 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 338 - -
Lapu8g01628 1014 SUPERFAMILY Protein kinase-like (PK-like) 683 1005 IPR011009 -
Lapu8g01628 1014 Gene3D Ribonuclease Inhibitor 338 646 IPR032675 -
Lapu8g01628 1014 Gene3D Transferase(Phosphotransferase) domain 1 792 1014 - -
Lapu8g01628 1014 FunFam LRR receptor-like serine/threonine-protein kinase EFR 681 791 - -
Lapu8g01628 1014 SUPERFAMILY L domain-like 57 345 - -
Lapu8g01628 1014 Gene3D Ribonuclease Inhibitor 31 169 IPR032675 -
Lapu8g01628 1014 SMART LRR_typ_2 122 146 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 565 588 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 493 516 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 220 243 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 589 614 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 420 444 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 517 541 IPR003591 -
Lapu8g01628 1014 SMART LRR_typ_2 172 196 IPR003591 -
Lapu8g01628 1014 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Lapu8g01628 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01628 Lapu-Chr8 33320309 33323544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01628 26 1012 Receptor kinase-like Gene Family AT3G47570 44.779 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu8g01628 Pkinase 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01628 - - gmx:100777490 1563.13