Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01627 ATGGCTCTAACTCTATTCATGTTTCTTCTCAGTGTTGTTTCACAAAACTCAGTCTGCATGATGCCTCGTACAGTTGCTCTTGCTTTCAGTTCAGAGAGTGACAAGCTGGCTTTACTTGCTTTGAAGCATAAGCTTGTCAATGGAGTGCCTGATGCTCTTCCATCATGGAACAACTCTTTGCATTTATGCGAGTGGCAGGGTGTTACATGCGGACATCGCCACATGAGAGTCTCTGTCTTGCACTTGGAAAATCAAAACTGGGGTGGCACTCTTGGACCACCTTTGGGAAATCTAACCTTCCTCACAAGCCTCATTCTTTCCAACATCAACTTGCATGGGGAAATTCCCACACAAATAGGTCGACTAAAGAGGTTGCAGGTTCTTGACTTGAGCCACAACAATCTAAATGGTCAGATTCCTATATACCTTTCTAACTGCTCTAAACTTGAGACGATTAACTTGTTGTACAATAAACTCACTGGAAAAGTTCCCTCCTGGTTTGGAATTGGATCCATGACACGGCTTAATAAGCTGCTTCTTGGGGCAAATGATCTAGTTGGTACTATCCCACCTTCCTTGGGGAATCTTTCATCCCTTCAAAATATCACAGTTGCAAGAAATCATTTGGTGGGAAGCATACCACATGTTTTGGGTCGGTTATCAAATTTGAAAGAGCTGAATCTTGGTTTAAATAATTTGTCTGGAGTAGTGCCTGATTCTCTTTATAACCTTTCCAATATTCAAATTTTTGTTCTCGGGGAAAACCAGTTATCTGGTACTCTTCCATCAAAAATGCAACTTGCTTTTCCAAACCTTCGAGCATTCTTGGTTGGAGGGAACAAGTTCAGTGGAGCTTTCCCTGCTTCAATATCCAACATCACCGGATTACAAGCGTTTGATATCTCCTTAAATGATTTTAGTGGGCCAATTCCTCCCACTTTGGGAAGATTAAACAAACTTAAGAAGTTTAGTATTGTATATAATAGTTTTGGAAGTGGGAGAGCTCAAGATTTAGATTTTCTTTCCTCTTTAACCAATTGTACTCAATTGAACATACTTCATTTGGGTTGGAATGAATTTGGTGGTGTCTTGCCAGATCTTATTGGCAATTTTTCTACCAATCTCACTTCGCTCAGTGTGGAGTTTAATCAAATATCTGGAATGATACCTGAAGAAATTGGGCAGCTAACCGGTTTAACTAACTTCGTCATGGTTAACAATTATCTAGAGGGAAGTATTCCAGATTCCATTGGAAAGCTTAAAAATCTAGTAAGATTGGCCCTCCAAGAAAATAAGTTGTCCGGTAATATTCCTACAGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTTCACACCAATAAATTCGAAGGAAGCATTCCATTAAGCCTCAAACACTGCACACGCATGCAGTCTTTTGGAGTTTCCAGCAATAACTTAAGTGGTGATATTCCTAGCCAAATATTTGGCAATCTAGAAGGTTTGATACAGCTTGACTTATCCGACAACTTTTTCTCTGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCATATTACATCTAAACGAAAACAAGTTGTCCGGTGAAATTCCCCTAGAGCTTGGAGCTTGTTCCGGATTAACAGAACTCATGTTGCAGATAAACTTCTTCCGGGGAAGCATACCTTCGTTCTTGGGCTCTTTAGGATCCCTGGAAATCCTAGACCTTTCCAACAACAACTTCTCAAGCACAATCCCTGGTGAACTACAAAATCTTACTTTTTTGTATACTTTGAACTTGTCTTCTAACCATCTTTATGGTGAGGTTCCCGTAGGAGGTGTCTTTAATAACATCACAGAAAATTCACTCATTGGAAATAAGGATCTCTGTGGGGGGATATCTCAACTAAAGCTCCCTGCATGCTCTACGGTTCCCTCAAAGAAACGCAAGTGGTCTTTTCGAAAGAAACTGGTCCTCATCATTGTAATCGGAGTTGGAGGGGCTTTGATCAGTTCCATAATATTTATCAGCGTCTACTATTTAAGGAAAAAGCCCAAATTATTTTGCTCGTCACGGTCTCTGCAAAATATGTATTTGAAGGTTTCTTATGAAGAGCTGCATGAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGTGCTGGAAGCTTTGGTTCTGTGTACCGAGGATCGCTTCTCCATTTTGAAAAATCCGTTGCTGTAAAGGTGTTGAGTCTTGGAGCTTGGGGGGCGTCAAAGAGTTTCACATCTGAATGCAAGGCTCTAGAAAAGATGAAGCACCAGAATGTACTTAAGATCCTGACTTATTTTTCAGGTGTTGATTATAATGGAGATGATTTCAAGGCTATAGTTTTTGAGTTCATGCTTAACGGGAGTCTAGAAAGTTTGCTGCACAGCGACGAAGAGCTCAAGTCTAGAAATCTCAATCCCAACCTTCAACTTAGGCTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCACCATGGTTCTGAGAAAACAGTAGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGACGTTGTTGCCCACCTAGGAGATTTTGGGTTAGCAAGGCTCCTTAATGTGGTGACGGGACATGCAAGTAGAGATCAGGTTAGTTCGTCAGCTATTAAAGGAACCATAGGATATGTTCCCCCAGAGTATGGAGCAGGTGGTCGAGTATCACCACAAGGAGATATTTACAGCTACGGAATTCTTGTGCTGGAGATGCTCACGGGAAAGAAACCAACAGATGAGATGTTTGGTGAGGATTTAAGCCTGCACAAATTCTGCCACATGGCAATTCCTGAAGGAATCCTTGAGATAGTAGATTCACGTTTGCTTCTGCAATTTACTAAAGAAGGAACAGGGGTCATGGAAACCAACATCAGAGAGTGTTTGGCGTCCTTCGCTAGGATTGGAGTTGCATGTTCTGCAGAATTGCCAGTTCAGCGGTTGAGCATAAAGGATGTAATAATGGAGTTGAATGCAATCAAACACAAGTTGTCTTACTAG 3045 0.4085 MALTLFMFLLSVVSQNSVCMMPRTVALAFSSESDKLALLALKHKLVNGVPDALPSWNNSLHLCEWQGVTCGHRHMRVSVLHLENQNWGGTLGPPLGNLTFLTSLILSNINLHGEIPTQIGRLKRLQVLDLSHNNLNGQIPIYLSNCSKLETINLLYNKLTGKVPSWFGIGSMTRLNKLLLGANDLVGTIPPSLGNLSSLQNITVARNHLVGSIPHVLGRLSNLKELNLGLNNLSGVVPDSLYNLSNIQIFVLGENQLSGTLPSKMQLAFPNLRAFLVGGNKFSGAFPASISNITGLQAFDISLNDFSGPIPPTLGRLNKLKKFSIVYNSFGSGRAQDLDFLSSLTNCTQLNILHLGWNEFGGVLPDLIGNFSTNLTSLSVEFNQISGMIPEEIGQLTGLTNFVMVNNYLEGSIPDSIGKLKNLVRLALQENKLSGNIPTAIGNLTMLSELYLHTNKFEGSIPLSLKHCTRMQSFGVSSNNLSGDIPSQIFGNLEGLIQLDLSDNFFSGSIPLEFGNLKHLSILHLNENKLSGEIPLELGACSGLTELMLQINFFRGSIPSFLGSLGSLEILDLSNNNFSSTIPGELQNLTFLYTLNLSSNHLYGEVPVGGVFNNITENSLIGNKDLCGGISQLKLPACSTVPSKKRKWSFRKKLVLIIVIGVGGALISSIIFISVYYLRKKPKLFCSSRSLQNMYLKVSYEELHEATNGFSSSNLVGAGSFGSVYRGSLLHFEKSVAVKVLSLGAWGASKSFTSECKALEKMKHQNVLKILTYFSGVDYNGDDFKAIVFEFMLNGSLESLLHSDEELKSRNLNPNLQLRLNIALDVANALDYLHHGSEKTVVHCDIKPSNVLLDDDVVAHLGDFGLARLLNVVTGHASRDQVSSSAIKGTIGYVPPEYGAGGRVSPQGDIYSYGILVLEMLTGKKPTDEMFGEDLSLHKFCHMAIPEGILEIVDSRLLLQFTKEGTGVMETNIRECLASFARIGVACSAELPVQRLSIKDVIMELNAIKHKLSY* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01627 1014 ProSiteProfiles Leucine-rich repeat profile. 567 590 IPR001611 GO:0005515
Lapu8g01627 1014 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Lapu8g01627 1014 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Lapu8g01627 1014 PANTHER RECEPTOR-LIKE PROTEIN 55 403 1010 - -
Lapu8g01627 1014 SMART LRR_typ_2 172 196 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 373 396 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 589 614 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 517 541 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 220 243 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 122 146 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 420 444 IPR003591 -
Lapu8g01627 1014 SMART LRR_typ_2 565 588 IPR003591 -
Lapu8g01627 1014 FunFam Nuclear pore complex protein NUP107 31 168 - -
Lapu8g01627 1014 Gene3D Phosphorylase Kinase; domain 1 690 791 - -
Lapu8g01627 1014 Gene3D Ribonuclease Inhibitor 338 646 IPR032675 -
Lapu8g01627 1014 SMART serkin_6 710 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01627 1014 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lapu8g01627 1014 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 348 641 - -
Lapu8g01627 1014 FunFam Lrr receptor-like serinethreonine-protein kinase gso2 267 347 - -
Lapu8g01627 1014 SUPERFAMILY RNI-like 269 608 - -
Lapu8g01627 1014 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Lapu8g01627 1014 Gene3D Ribonuclease Inhibitor 269 337 IPR032675 -
Lapu8g01627 1014 SUPERFAMILY L domain-like 30 330 - -
Lapu8g01627 1014 SUPERFAMILY Protein kinase-like (PK-like) 691 1005 IPR011009 -
Lapu8g01627 1014 Gene3D Transferase(Phosphotransferase) domain 1 792 1013 - -
Lapu8g01627 1014 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Lapu8g01627 1014 ProSiteProfiles Protein kinase domain profile. 710 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01627 1014 Gene3D Ribonuclease Inhibitor 173 268 IPR032675 -
Lapu8g01627 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Lapu8g01627 1014 FunFam Leucine-rich repeat receptor protein kinase EMS1 169 264 - -
Lapu8g01627 1014 PRINTS Leucine-rich repeat signature 565 578 - -
Lapu8g01627 1014 PRINTS Leucine-rich repeat signature 125 138 - -
Lapu8g01627 1014 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 792 1014 - -
Lapu8g01627 1014 Pfam Protein kinase domain 712 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01627 Lapu-Chr8 33314902 33318196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01627 28 1012 Receptor kinase-like Gene Family AT3G47570 43.807 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu8g01627 Pkinase 9.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01627 - - gmx:100776429 1538.86