Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01622 ATGGCGGGAAAACTGGCAAAGGCAGCTTATGATGCAAAGATGTTGAAGCTTCTGAGAGAGTACAGCCAGGTGCTGGTGGTTTCATCGGACAATGTGGGTTCCAATCAGCTTCAGGGCATACGGAGGAGACTCCATGCTGATTCAGTTGTGGTGATGGGAAAGAACTCCATGATGAAACGCTCTATCATCTTGGATGCTCAGAAGACTGGCAACAAGGCCTTCCTTAACCTTGTCCCCCTTCTTGTGGGAAATGTGGCGTTAATTTTCACCAAAGGTGACTTGAGGGAGGTTAGCGAACAGATTGCCAAGTACAAGGTTGTTCCACCTATTCTAATGTGCCCCAAGTATATGTCATATGACACATACCACAGTTGTTCCTATATGCAATCTGGACAGTTACCGTTGGGCCTCACATGTTGTAATCAGCAGCAGTCTTCGCAGATTTCTGAGCCTTTTCTTGTATGCTCAAAATTCCTGCCACACCAACATTGTTTCTTGATGAGATCAAGACAGTTCTTGACAACGAGTATATGGTCTCCTCTTCTCCTTTTGGCTGGCAACTTGTGA 567 0.4586 MAGKLAKAAYDAKMLKLLREYSQVLVVSSDNVGSNQLQGIRRRLHADSVVVMGKNSMMKRSIILDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVPPILMCPKYMSYDTYHSCSYMQSGQLPLGLTCCNQQQSSQISEPFLVCSKFLPHQHCFLMRSRQFLTTSIWSPLLLLAGNL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01622 188 SUPERFAMILY Ribosomal protein L10-like 7 104 IPR043141 -
Lapu8g01622 188 Gene3D - 4 125 IPR043141 -
Lapu8g01622 188 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 6 137 - -
Lapu8g01622 188 FunFam 60S acidic ribosomal protein P0 4 135 - -
Lapu8g01622 188 Pfam Ribosomal protein L10 6 104 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01622 Lapu-Chr8 33271589 33275507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01622 7 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 67.961 3.10e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01622 K02941 - mnt:21409050 156.762