Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01615 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGAGTTTTTGCGGAAGAATGGTTTGTCGGAAGCGGAGTCCGCGCTCCGAGAAGACATCATCGAGAACACCGACCTCGGAAACTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCCCGCCGCCGCCGCCGGTCAGAGTCCGATCCTTCTCCCAACCGTCCGAGCTCGCCGCCGCGAACGACGACAGCTCCAAATCCAGCTCTGACGAGTTCGTCACCATCGGTTCTTCCACTTCTCGCGTCTCCTCTTCAGAATTCATAAATCCATATGGAATCCGTTCCTCGTCTCAGACTCAGAATGATTCCGAATCTTCGTCTGAAAGATTATCTCAGTTTGGCACAGCACGTGATTATAACGATTTTGATATGCAAAATGAACCGTATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCAGATTTTTTTGCGTGTCAGAGTGAAGATAAGTTTGTCATGACAGCAGAAACGGAAAACCAACTTGACAATTCTCTGCACCTTGGTTACAACTATGAAGAATTTCAACTGAAGGGGAATAGTAATGGTGGTTACATGGACAAGGCATGCCTCTATAATCATTCCTCTGTAGGGGATGGAACTGTGACTTATTCAAAAGGGAACTGTCATGTTGATAATAACGACCAGTTTGAAGGGGAACTAGAGGGTGAGGCTGAGAAACGCAGTGCTGCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCTGGTTCTGGAGGTTCTTGCAGTTTGGATCCTACAAACTTCGGCTACCCTAACTTGAAGGAAATCCATCTGAACAACTTTAATTTGAAGGTTGTTGGGGACATTAACTCTTTTGATTCTACTTCAGAGCTAACTCTGAATCAAAGTTTTGACTACTACACTAAAAACGACAGCAGTAAGGAGTACAAGGGTCCTTACGACTTAACTATCAAAGTTACTGATAAAAATCTACCAAATGAACTTGACTCGTATAAAGCACAAATTGGTGGAGAATTAACTGAAGACTGCCAAGATACAGAGCTTGCTGCAGATGGAGAGGATACCACTGACGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATACGAAGTGTTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAATAAGGAACTTCCCATCGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGTTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTAGTCAACAAGCATGACCCAGCAGATGAACATCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTGTATGAATTTCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAAGAGATTGCAGGTCATTACTCGTCAGTGTTTAGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGAAGTAGTTGCTTCCTAACAGACACTCTGTGCCTATATGTACAGTCCAGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTCGGCTGCATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTGTTCCCAAATGATGCAGTTGTGATGATTCTGGCACGCATGATTGGAATGTTTGGTTCTATTGATATGGAAATGTTGGTGAAAGGACAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAACTGGAGTACTTAATTCCAGAAGAGTCATCGTTGGAGCAGCACCTACAGGTTACTGATACTATGTTTATCAACTTTATCAGATACCTACTCTGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCACTAAAGCATCCATGGCTTTCCTATGTTTACTAG 2160 0.4162 MAVSNGVEAVLEFLRKNGLSEAESALREDIIENTDLGNFDYEKFFFPMVPPPPPVRVRSFSQPSELAAANDDSSKSSSDEFVTIGSSTSRVSSSEFINPYGIRSSSQTQNDSESSSERLSQFGTARDYNDFDMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAETENQLDNSLHLGYNYEEFQLKGNSNGGYMDKACLYNHSSVGDGTVTYSKGNCHVDNNDQFEGELEGEAEKRSAACSCEVPFCKSSPGSGGSCSLDPTNFGYPNLKEIHLNNFNLKVVGDINSFDSTSELTLNQSFDYYTKNDSSKEYKGPYDLTIKVTDKNLPNELDSYKAQIGGELTEDCQDTELAADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLKRLQVITRQCLEALQYLHSLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFLTDTLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGSIDMEMLVKGQETHKYFTKEYDIYYVNEETDQLEYLIPEESSLEQHLQVTDTMFINFIRYLLCINPKRRPTARQALKHPWLSYVY* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01615 719 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01615 719 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Lapu8g01615 719 MobiDBLite consensus disorder prediction 63 84 - -
Lapu8g01615 719 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01615 719 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01615 719 CDD PKc_DYRK_like 413 715 - -
Lapu8g01615 719 MobiDBLite consensus disorder prediction 100 123 - -
Lapu8g01615 719 SUPERFAMILY Protein kinase-like (PK-like) 402 716 IPR011009 -
Lapu8g01615 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Lapu8g01615 719 FunFam Serine/threonine-protein kinase ppk15 492 716 - -
Lapu8g01615 719 PANTHER DUAL SPECIFICITY PROTEIN KINASE 107 715 - -
Lapu8g01615 719 MobiDBLite consensus disorder prediction 56 84 - -
Lapu8g01615 719 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Lapu8g01615 719 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Lapu8g01615 719 MobiDBLite consensus disorder prediction 100 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01615 Lapu-Chr8 33199316 33205368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01615 410 710 MAP Kinase Gene Family AT5G19010 31.464 3.76e-34 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lapu8g01615 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01615 - - gmx:100783988 1273.07