Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01611 ATGACATTCAAGCGCAGGAATGGAGGTCGCAACAAGCACGGTCGCGGCCACGTCAAATTCATTCGTTGCTCCAACTGTGGCAAGTGCTGCCCCAAGGACAAGGCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTCAGAGATGTGCAGGAGGCTTGTGTATACGAGCAATACACGCTTCCAAAACTATATGTGAAGATGCAGTACTGTGTTTCTTGCGCTATCCACTCTCATGTTGTTAGGGTTCGGTCCCGTACCGACAGGAGGAAGCGTGACCCTCCACCGCGATTCATCAGGCGCAGGGATGATGCACAAAGGCCTGGTCAGCCAGGTCAAGCACCTCGTCCTGCTGGGGCAGGACCTCCTGTCCGAACCTGA 390 0.5385 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPPRFIRRRDDAQRPGQPGQAPRPAGAGPPVRT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01611 129 MobiDBLite consensus disorder prediction 86 129 - -
Lapu8g01611 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lapu8g01611 129 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Lapu8g01611 129 FunFam 40S ribosomal protein S26 1 114 - -
Lapu8g01611 129 MobiDBLite consensus disorder prediction 90 110 - -
Lapu8g01611 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lapu8g01611 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01611 Lapu-Chr8 33143622 33145640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01611 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 84.483 1.23e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01611 K02976 - gmx:100808790 187.578