Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01604 ATGACCGGCGGTGGCGACGATCGCGTCAAAGGCTCGTGGAGCCCTCAGGAGGACGCGACGCTGCTGAAATTGGTGAACGAGCACGGCGCGCGGAACTGGTCCATCATCAGCAGCGGCATTCCGGGGCGCTCCGGCAAGTCGTGTCGGCTGCGATGGTGCAACCAGCTGAGCCCGGAGGTGCAGCATCGCCCCTTCACGTCGGCGGAGGACAAGATCATCATCAAGGCGCACGCTATTCACGGGAACAAGTGGGCCACCATCTCGCGCCTCCTCCCTGGCCGAACCGACAACGCCATTAAGAACCACTGGAACTCCACCCTCCGCCGCCGCGGCACGATGGAGCAGTCCTCTTCGGCATCGCCAAGCGCCAAGCGCCCCTCTTCGCTGGAGTGGTTCTACCCTTTCAAGAAACAGCGCGCGGAGAAGGAAAGCGAGGAAGAGCGCGAGGCGATTCCCTTTATCACGCCGTTGAGTCTTTTCCCGCCTGGGGAAAAATCAGAGGGAGAAGTGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAAGAGAGAAAGAAGAGTTTGAAGTGAATGATAATAACACGGTTTCTGATCAGGATTATTTTCTGCGGATGATGCAGCGGATGATAGCAGATGAGAGGAAGAAGGGGTTGGAGGAATCAAGTGATTAA 669 0.571 MTGGGDDRVKGSWSPQEDATLLKLVNEHGARNWSIISSGIPGRSGKSCRLRWCNQLSPEVQHRPFTSAEDKIIIKAHAIHGNKWATISRLLPGRTDNAIKNHWNSTLRRRGTMEQSSSASPSAKRPSSLEWFYPFKKQRAEKESEEEREAIPFITPLSLFPPGEKSEGEVEEEEEEEEEEEREKEEFEVNDNNTVSDQDYFLRMMQRMIADERKKGLEESSD* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01604 222 FunFam Transcription factor MYB44 64 110 - -
Lapu8g01604 222 Gene3D - 63 130 - -
Lapu8g01604 222 ProSiteProfiles Myb-like domain profile. 5 56 IPR001005 -
Lapu8g01604 222 FunFam MYB transcription factor 10 61 - -
Lapu8g01604 222 CDD SANT 64 107 IPR001005 -
Lapu8g01604 222 PANTHER MYB PROTEIN-RELATED 10 125 - -
Lapu8g01604 222 MobiDBLite consensus disorder prediction 142 198 - -
Lapu8g01604 222 Coils Coil 163 190 - -
Lapu8g01604 222 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Lapu8g01604 222 Pfam Myb-like DNA-binding domain 64 106 IPR001005 -
Lapu8g01604 222 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
Lapu8g01604 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 60 IPR017930 -
Lapu8g01604 222 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Lapu8g01604 222 MobiDBLite consensus disorder prediction 107 126 - -
Lapu8g01604 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Lapu8g01604 222 MobiDBLite consensus disorder prediction 107 125 - -
Lapu8g01604 222 MobiDBLite consensus disorder prediction 167 186 - -
Lapu8g01604 222 CDD SANT 12 54 IPR001005 -
Lapu8g01604 222 SMART sant 9 58 IPR001005 -
Lapu8g01604 222 SMART sant 61 109 IPR001005 -
Lapu8g01604 222 Gene3D - 9 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01604 Lapu-Chr8 33038994 33041222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01604 7 117 MYB Transcription Factor Family AT4G37260 71.171 1.13e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu8g01604 Myb_DNA-binding 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01604 - - vra:106763298 293.508