Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01600 ATGAAGGGTTATGAGCCACGTTCAAGTTCCTCTTGTGCTGCCTGCAAGTTCTTGAAGAGAAGATGCATACCGAATTGTATATTTGCACCTTACTTTCGCTCTGACGAGTGCAAGAAATTTGCCAAGGTGCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATCGAAGTTCCTGAGGAGCAGAGAGAGGACACTGTGAATTCTCTTGCTTATGAGGCAGAAGCCAGGCTTAGGGACCCCATTTATGGATGCATTGGTGCCATAGCTCTTCTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGACCGTCTTGCTCGTTATGCTGTTGCTGCCACCCCTCCTTCCACCACCACCACCACCACCGATACCTTCAATGCCCATGTTAGTTTGCCACCCTTCCCTGAATTTTTCTCTTGCGCCGATTTCAATGACAACTTCTGCCACACCTCTTCCTCTCAATCTCCGCCATTGACCAGACATGAAACTGTCGATGATTTCATTCAAATCCCTTATATATTGTGA 543 0.4751 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPIYGCIGAIALLQRKMVELQHDLAIAKDRLARYAVAATPPSTTTTTTDTFNAHVSLPPFPEFFSCADFNDNFCHTSSSQSPPLTRHETVDDFIQIPYIL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01600 180 Coils Coil 90 110 - -
Lapu8g01600 180 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Lapu8g01600 180 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lapu8g01600 180 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01600 Lapu-Chr8 32989966 32990819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01600 1 144 AS2 family AT3G11090 63.194 5.01e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g01600 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01600 - - gmx:100777635 315.464