Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01596 ATGGAAAAGAACAGGAAACTCAGCCGGTTGCAGGATCTTTGTATAGCTGTGCGCCTTGTGGCGGTTTTTTTCTTGTTTCAGAACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAAGGCTCTTTTGAAGTTGAGGCAGAGAATTGTGAGTGACCCTTTTGATGCTTTGTCTAATTGGGTTGATGATGAGGCATCTTTTGACCCTTGTAATTGGTTTGGAGTTGAATGCTCGGATGGAAGAGTTGTGGCCTTGAATTTGAAGGATCTCTGCCTTGAAGGAACTCTGGCACCTGAGCTTGTGAAACTTGTCCACATAAAGTCCATTATTTTGAGGAACAACACTTTCTTTGGGTCCATCCCTGAAGGATTTGTGGTGTTAAAAGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACGTCTACCTGTTGATCTCGGGAGTAATGTCTCACTAACAATCCTTTTGCTGGATAACAATGAATTTCTTGTTGGTTTCTCTCCGGAAATTGATGAACTGAGGATGCTTTCTGAATGCCAAGTAGATGAAAATCAGCTAACTAATGCTGCTAAAATGCCAGCTTGTATAGAAAGAGTCACCACATGGCATATTGGTCAAGGTAAAGGTACTCGTGGGCTACTTGGATCATTTTATCGTGATCATGAGGGCCGTCGTAAGGGTGCTGTTAGGCCTTCTGCTATCCCACCAGCCTCAGCAAAATCACTAGTGCCAAAGCCAACTCACCCTGGGAAAAGTGCTTCTAATTCTCCTTCTCCTTCTGCTTCCGTACCAGCCTCAACAAAATCTCCAGTGCCAAAGCCAACTACCCCCGGGAAAAATGCCTCTAATTCTCCTTCTCCCCGTTCTACGTCAGGTTCTAGAGCAATTTCTAAAGCTGAAAAAAGAACCTCATCAAAGGTTCATATTTTGGTTGGAGTTATAGGTGGTGCAGTGTTTCTTCTTTTATTAACCATTGGCATATATCTTTGTAAAACAAGGGTGGCTAATGTCAGACCTTGGGCCACGGGACTAAGTGGGCAGCTTCAGAAGGCATTTGTAACTGGTGCGCAAAAGCTAAGGAGATTAGATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCTAATCGCACACTGTACAAAGGAACTTTATCTAGTGGCGTTGAAATAGCTGTAACTTCTGTTCCGGTGACATCATCCAAGAATTGGTCAAAGACTTTAGAAGTTCAATTTAGAAACAAGATAGATACATTATCGAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATACTGTGAAGAAGAGGAACCTTTCACCAGAATGCTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGGTGACAAGACTTAGAATTGCAACGGGTATGGCTTATTGCTTGCAACATATGCATCAATTGGACCCTCCTATGGTCCTTACCAAGCTGAATTCTCAAGCTGTTTACTTGACTGATGACTATGCTGCCAAACTCTCAGATTTGAGTTTCTCCTATGACATAACCTCAGCTGAGATAAAAGCTATTGACATGCCAAAAGCAAGTCCAGAAAGTAACGTTTATAGCTTTGGTGTTTTGTTATTTGAGATGCTTACTGGTCGTCTCCCTCGTTCAGAGGAACAAAGGGACTCACTTCAGAACTGGGCATCACACTATTTACAAGGAGACCAACCCCTCAAAGATATAGTGGATCCAACTCTAGTATCTTACCAAGAGGATCAGCTGGAACAAGTTGCTGCATTGATTAAATCTTGCGTGCACCCTGATCCAAAGCAAAGACCAACAATGAAAGATGTCAGTGAGAGACTAAGAGAGATAACAAAGATAACACCTGAATCAGCAGTTCCAAAAGTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTATAGAAGCGCGTTGA 1980 0.4202 MEKNRKLSRLQDLCIAVRLVAVFFLFQNLGLCCSLNEEGKALLKLRQRIVSDPFDALSNWVDDEASFDPCNWFGVECSDGRVVALNLKDLCLEGTLAPELVKLVHIKSIILRNNTFFGSIPEGFVVLKELEVLDLGYNNFSGRLPVDLGSNVSLTILLLDNNEFLVGFSPEIDELRMLSECQVDENQLTNAAKMPACIERVTTWHIGQGKGTRGLLGSFYRDHEGRRKGAVRPSAIPPASAKSLVPKPTHPGKSASNSPSPSASVPASTKSPVPKPTTPGKNASNSPSPRSTSGSRAISKAEKRTSSKVHILVGVIGGAVFLLLLTIGIYLCKTRVANVRPWATGLSGQLQKAFVTGAQKLRRLDLEVACEDFSNVIGTSPNRTLYKGTLSSGVEIAVTSVPVTSSKNWSKTLEVQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWVTRLRIATGMAYCLQHMHQLDPPMVLTKLNSQAVYLTDDYAAKLSDLSFSYDITSAEIKAIDMPKASPESNVYSFGVLLFEMLTGRLPRSEEQRDSLQNWASHYLQGDQPLKDIVDPTLVSYQEDQLEQVAALIKSCVHPDPKQRPTMKDVSERLREITKITPESAVPKVSPLWWAELEIASIEAR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01596 659 Gene3D Ribonuclease Inhibitor 33 205 IPR032675 -
Lapu8g01596 659 FunFam Nuclear pore complex protein NUP107 35 194 - -
Lapu8g01596 659 PANTHER PROTEIN MALE DISCOVERER 2 15 657 - -
Lapu8g01596 659 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Lapu8g01596 659 Pfam Protein tyrosine and serine/threonine kinase 376 628 IPR001245 GO:0004672|GO:0006468
Lapu8g01596 659 SUPERFAMILY L domain-like 38 191 - -
Lapu8g01596 659 ProSiteProfiles Protein kinase domain profile. 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01596 659 Gene3D Transferase(Phosphotransferase) domain 1 454 641 - -
Lapu8g01596 659 SUPERFAMILY Protein kinase-like (PK-like) 357 628 IPR011009 -
Lapu8g01596 659 Gene3D Phosphorylase Kinase; domain 1 348 453 - -
Lapu8g01596 659 FunFam Inactive receptor-like serine/threonine-protein kinase 345 453 - -
Lapu8g01596 659 MobiDBLite consensus disorder prediction 250 300 - -
Lapu8g01596 659 MobiDBLite consensus disorder prediction 226 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01596 Lapu-Chr8 32963856 32968359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01596 23 628 Receptor kinase-like Gene Family AT5G16000 25.385 2.20e-41 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu8g01596 PK_Tyr_Ser-Thr 1.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01596 - - gmx:100792450 982.245