Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01584 ATGGGTGGAAATTCCCCTTGTGCCTCTTGCAAATTGTTGAGACGCAGGTGCACAAAAGATTGCATCTTCGCTCCTTATTTTCCTCCTGATGAACCTCAAAGGTTTGCCATAGTTCACAAGGTTTTTGGTGCTAGCAATGTCAGCAAAATGTTGCAGGAACTTCCAGTTCAGCAGAGAGCAGATGCAGTGAGTAGTTTAGTGTATGAGGCAAGTGCAAGACTTAGGGACCCTGTGTATGGTTGTGTTGGAGCCATATCCTATTTGCAAAATCAAGTTGCTGAGCTTCAAATGCAGCTTGCAGTTGCTCAAGCAGAGATACTCTGCATTCAGATGGAAAATGAGCCACTGGTGCCACCCTCAGAAACTGATCCAAATGACAAGTCTTATTTTCTTCAGAATAATCTCCCTCAGATTCTTGATTCTGATACTTCTAACAATAAAGACAAAATGGGTGGTAACTTATAA 465 0.4237 MGGNSPCASCKLLRRRCTKDCIFAPYFPPDEPQRFAIVHKVFGASNVSKMLQELPVQQRADAVSSLVYEASARLRDPVYGCVGAISYLQNQVAELQMQLAVAQAEILCIQMENEPLVPPSETDPNDKSYFLQNNLPQILDSDTSNNKDKMGGNL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01584 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 126 - -
Lapu8g01584 154 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lapu8g01584 154 Coils Coil 85 112 - -
Lapu8g01584 154 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01584 Lapu-Chr8 32881641 32882528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01584 3 131 AS2 family AT2G30130 78.195 1.36e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g01584 LOB 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01584 - - gmx:100812780 250.751