Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01576 ATGGAGAACAAGAACCTCACCTCAAAATGTTTTTACCGTAGCCATTCTCAAAATGGGGTGAGGAATGCCGCAGATAGTCATTTTTTCCGCTTGTTTTTCTGCTTGTGGTTTATTGTTTTGCCAGTGTTTGGTGAAGAGCGTTGGGATGGAGTTGTTGTGACACAGTCAAACTTCCTAGCACTTCAGGCATTCAAGCAAGAGTTGGTTGATCCCGAAGGCTTCTTGAGAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGTATCAAGTGTGCCCAGGGACAGGTTATTGTGATCCAGCTTCCGTGGAAGGGGTTGAAGGGGCACATCACCGAGAGGATTGGCCAACTTCAGGGGCTTAGAAAGCTTAGTCTCCACGATAACCAAATTGGTGGTTCCATCCCTTCAGCACTGGGACTTCTTCTCGATCTAAGAGGGGTTCAACTCTTCAACAATAGGTTCACCGGGTCCATCCCGTCTTCATTAGGTTCCTGTTCTTTGCTTCAGTCTTTAGACCTCAGTAACAATCTGCTCAGTGGAATAATCCCGATGAGCCTTGGGAATGCCACTAAGCTTTATTGGCTTAACTTGAGCTTTAATTCCTTCTCTGGCCCAATACCAACTAGCTTAACTCGCTTAACTTCTCTCACCTACTTATCTCTTCAACACAATAATCTCTCGGGCTCTATTCCAAACTCATGGGGTGGTACCTTGAGGAACCACTTCTTTCGGCTACAAAATCTGATCCTAGATCATAACTTCTTGAGTGGAAGCATTCCTGCTTCCTTGGGCAACTTGAGTGAACTCACAGAGATTTCTCTTAGTCATAACCAGCTTAGAGGAGCTATCCCAAATGAAGTAGGAAGCCTTCATAGACTTAAGACATTAGATTTTTCTAGTAATGCATTGAATGGAAGCTTGCCTTCCACTCTCGCTAATGTATCCTCACTCACTCTCTTGAATGTAGAGAACAACCACCTTGGCAATCAAATCCCAGAAGCTTTAGGCAGACTGCACAATCTCTCTGTTCTAGTTTTGAGCAGAAACCAATTTACTGGGCACATTCCTCAAAGTTTTGGAAACATTTCAAAGCTTACACAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGCATCCTTTGGAGATCTGCGAGGTCTTCATTTCTTAAACGTTTCTCATAACAACCTCTCCGGTCCAGTTCCAACCCTACTTGCGCATAAATTTAATTCAAGCTCATTTGTGGGGAATATTCAACTATGTGGATATAGCCCTTCTACTCCGTGTCCTTCGGCAGCTCCTTTTGGTTCACCAACAGATATATCAGAACACCATCAACACAAGAAACTAGGCACCAAAGACATAATTCTCATAGTAGCAGGAGTGCTCCTCGTAGTCCTGGTAACACTTTGCTGCATTCTGCTATTCTGCCTAATCAGAAAAAGAACAGCATCAAATGCAGAGGGTGGCCAGGCCACAGGGAGAGCATCTGCATCTGCTGCAAGGACAGAAAAAGGAGCCCCTCCTGTTGCAGGTGAAACTGAAGCGGGTGGTGGTGAGGCTGGTGGTAAACTAGTCCATTTTGATGGACCATTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCGGAGATAATGGGAAAGAGTACGTATGGAACTGTTTACAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTTAAACGATTAAGGGAAAAGATTACGAAAGGTCAGAGAGAATTCGAATCTGAAGTTAGTGTTATAGGAAGAATTCGACACCCAAATCTTCTGGCATTGAGAGCCTATTACTTGGGACCCAAAGGAGAAAAGCTTCTAGTATTTGATTACATGCCTAAGGGAAGTCTTGCTTCCTTTCTACACGCTCGTGGGCCCGAAACAGCCATTGATTGGCCAACAAGGATGAAAATAGCACAGGGAATGGCTCGTGGCTTGTTATACCTTCATTCCAGTGAGAACATTATACATGGGAACCTTACGTCCAGCAATGTGCTGCTGGATGAAAGTACGAATGCTAAAATAGCGGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAACGTGATTGCCACTGCTGGAGCATTGGGATACCGAGCACCTGAACTCTCTAAGCTTAAAAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACAGGAAAGCCACCTGGTGAGGCTTTGAATGGCGTGGATTTACCTCAGTGGGTTGCTTCCATTGTCAAAGAGGAGTGGACAAATGAAGTTTTCGATGTGGAGTTGATGAGAGATGCTTCAACATATGGCGACGAAATGCTGAACACGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTCCAGCAAGTCCTTCAGCAGCTCGAAGAGATTAGACCGGAGATATCAGCCAGCTCGGGTGACGATGGAGCCATCCCTTCGACCAGTGAATGA 2514 0.4491 MENKNLTSKCFYRSHSQNGVRNAADSHFFRLFFCLWFIVLPVFGEERWDGVVVTQSNFLALQAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLQGLRKLSLHDNQIGGSIPSALGLLLDLRGVQLFNNRFTGSIPSSLGSCSLLQSLDLSNNLLSGIIPMSLGNATKLYWLNLSFNSFSGPIPTSLTRLTSLTYLSLQHNNLSGSIPNSWGGTLRNHFFRLQNLILDHNFLSGSIPASLGNLSELTEISLSHNQLRGAIPNEVGSLHRLKTLDFSSNALNGSLPSTLANVSSLTLLNVENNHLGNQIPEALGRLHNLSVLVLSRNQFTGHIPQSFGNISKLTQLDLSLNNLSGEIPASFGDLRGLHFLNVSHNNLSGPVPTLLAHKFNSSSFVGNIQLCGYSPSTPCPSAAPFGSPTDISEHHQHKKLGTKDIILIVAGVLLVVLVTLCCILLFCLIRKRTASNAEGGQATGRASASAARTEKGAPPVAGETEAGGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPETAIDWPTRMKIAQGMARGLLYLHSSENIIHGNLTSSNVLLDESTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDEMLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPEISASSGDDGAIPSTSE* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01576 837 Gene3D Ribonuclease Inhibitor 311 437 IPR032675 -
Lapu8g01576 837 Gene3D Ribonuclease Inhibitor 211 310 IPR032675 -
Lapu8g01576 837 Gene3D Ribonuclease Inhibitor 55 210 IPR032675 -
Lapu8g01576 837 ProSiteProfiles Protein kinase domain profile. 547 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01576 837 FunFam Pollen receptor-like kinase 1 624 828 - -
Lapu8g01576 837 Pfam Leucine rich repeat N-terminal domain 59 95 IPR013210 -
Lapu8g01576 837 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 248 818 - -
Lapu8g01576 837 MobiDBLite consensus disorder prediction 818 837 - -
Lapu8g01576 837 Pfam Protein tyrosine and serine/threonine kinase 550 815 IPR001245 GO:0004672|GO:0006468
Lapu8g01576 837 Gene3D Transferase(Phosphotransferase) domain 1 625 829 - -
Lapu8g01576 837 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 244 439 - -
Lapu8g01576 837 PRINTS Leucine-rich repeat signature 172 185 - -
Lapu8g01576 837 PRINTS Leucine-rich repeat signature 270 283 - -
Lapu8g01576 837 MobiDBLite consensus disorder prediction 494 524 - -
Lapu8g01576 837 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Lapu8g01576 837 Pfam Leucine rich repeat 172 230 IPR001611 GO:0005515
Lapu8g01576 837 SMART LRR_typ_2 318 341 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 121 145 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 294 317 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 390 413 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 169 192 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 366 389 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 270 293 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 342 365 IPR003591 -
Lapu8g01576 837 SMART LRR_typ_2 217 240 IPR003591 -
Lapu8g01576 837 SUPERFAMILY L domain-like 94 429 - -
Lapu8g01576 837 CDD STKc_IRAK 553 818 - -
Lapu8g01576 837 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 169 243 - -
Lapu8g01576 837 FunFam Leucine-rich repeat receptor-like kinase 56 168 - -
Lapu8g01576 837 FunFam Leucine-rich repeat receptor-like protein kinase 532 623 - -
Lapu8g01576 837 SUPERFAMILY Protein kinase-like (PK-like) 551 819 IPR011009 -
Lapu8g01576 837 Gene3D Phosphorylase Kinase; domain 1 553 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01576 Lapu-Chr8 32802670 32805693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01576 48 820 Receptor kinase-like Gene Family AT3G51740 64.487 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g01576 PK_Tyr_Ser-Thr 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01576 - - gmx:100811174 1362.82