Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01515 ATGGTCTTCACTAAGCTTTCATTAATTTTCTGTTCACTTTTAGGCCTCCATTTCTCCCCACTTTTCACCATTTTTTCTTTTGCTGCCACCACTGATGAAAACCAAGTGAGGGAAGCAGGTGCTTTACTTGAGTGGAAAGCTAGCCTTGAAAACCAAAGCCAAGCTTCTCTGTCTTCATGGAGCGGAGGTGTGAGTCATTGCAAGTGGAAAGAAATCATATGTGACAAATCCAACTCTGTCACCACTATAAATGTAGCAAATCATGGCATAAAAGGTACTCTTCACACTCTCAACTTCTCATCCTTTCCCAACCTACTAACTCTGGATGTTAGTGACAACAGTTTCAGTGATACTATTCCTCACCAAATTGCTAACTTGTCCAGAGTGTCTCAGTTGAAAATGAATAATAATAATTTTAGTGGTCCAATCCCCATTTCCATGATGAAGTTGGCTACCTTGAAGATTCTAAACTTGAAATACAATAGCCTTTCTGGCCCTCTTCCCGAGGAAATTGCAGAATTGAGGAACTTAGAGCTTATGTTATTTGAATCAAATCACCTTTCTGGAACCATTCCTCCAACAATTGGAAGGATGGCCAACCTTGTTGAACTCAATTTGCAACATAACTCTATCAATGGTACAATCCACCCTTCAATTAGAAACTTGACAAATTTAAAATTCCTCAGGCTCCAAGAAAATAGTCTCTCTGGCCCAATTCCACACTTCATAGGAGACATGACCAATTTGCGTGTTCTTGAAATCGATCAAAATAGATTTACAGGACCAATTCCTCCCCATATTGGAAACTTGACAAAGATGGTCAATATGTCCTTGGCCTCTAACATGCTTTCTGGACCAATTCCTCCCTCCCTTGGAAACTTGGTCAATCTAGAGGCCTTAGAACTTGCCATGAACAATCTTTCCGGAGTTATTCCTTCCACCTTAGGAAATTTGACAAACCCCATCTTTTTTAATGTGTTACAAAACAAACTTGAAGGCAGATTACCACCTGGAATGAATAACTTCACCAATTTAATGAACTTACAACTTGGTAAAAATAGTTTCACTGGCCCTCTGCCACAACAAATTTGCCTTGGTGGGTCACTAATCGCATTTTCTGCTGAAGATAATAATTTCATTGGCCCAGTTCCAATAAGCCTGAAAAATTGCTCCACTCTTTTTAGACTCAGACTAGATGGAAACCAGTTGAGTGGAAATATATCAGATGATTTTGGTGTTTATCCATCGTTGACATACATCGATCTGAGTAGGAATAACTTTTATGGCCACATTTCCCCAAATTGGGCAAAGTGTCCTGCTCTCTCAAGCCTTATAATGCCCAACAACAACTTATCTGGTAGTATACCACCAGAACTCAGCCAGGCACCCAAACTAGAACAACTTGTCTTGTCTACAAATCATTTAACAGGGAAAATTCCAAAAGAACTCGGGAAGTTGACCTCTTTGTTGAAGTTATCACTAAGCAACAATGAACTTTCCGGCACCATACCTATAGAAATAGGTGCTTTGTCAAGCCTTGACACTTTGGAGCTTTCAGCAAATAATTTAGATGGTGCAATTCCCAAACAGTTGGGAGAGTTATTCAAGTTGCTTCACTTGAACTTGAGCAACAACAGATTGACAGAGAGCATTCCCTTGGAAATTGACCGTTTGCAATCTCTTGAAAGTCTTGATCTTAGTTTCAATTTGTTAAATGGAGAAATATCATCAGCACTTGCAAGTATGCAGAGATTGGAAACGCTAAATCTCTCACACAACAATCTCTCTGGAGCCATTCCATCTAATTTTAAGGATGTTTTGGCAAACGTTGACATATCTAACAACCAATTGGAGGGTCCAATTCCTAACAGTCGAGCCTTTCTCAATGCTCCATTTGATGCATTGAAAGGTAATAAAGGCTTGTGTGGAAATGTCTCCGGTTTGGTGCCTTGCAGAAGTCGTAATGGTAAAGAGAAAAGAAATGTCACCATGTTGGCATTAGTCCTTACTTTGGGTGCTCTACTTCTAGTGGTACTCGTGGTTGGAGTTTTCTTATGTATTCGCTACAGAAGAGCAATAGAAGGCAAAAAGGAGGAGGCCAAAGAAGAAAAAACTCAGGAACATCATGCCATATGGAGTTATGATGGAAAATTAGTGTATGAAAATATCATTGAAGCCACGGAGGGGTTTGATGACAAATATCTCATTGGAGAAGGAGGGTCGGCATCTGTTTACAAGGCTAAATTACCCACAGGACAGATTGTTGCTGTGAAAAAGCTTAATGCTGCACCCAATGAAGAAACAGTGAATTTAAAAGCTTTTATGACTGAGGTCAAAGCCTTGGCAGAAATCAAGCATCGTAACATTGTGAAGTCACTTGGATATTGTTTACACCCACGTTTCTCCTTTTTGGTTTATGAGTTCCTTGAAGGGGGTAGTTTGGATAAAGTAGTCATCGATGATACACGTGCAACAATGTTTGATTGGAACATGAGGGTAAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTACCATATGCATCATGGTTGTTTTCCACCTATTATTCACCGAGACATATCAAGCAAGAATATTCTTATAGATTCGGAATACGAAGCCCGCATTTCTGACTTTGGAACAGCTAAAATTCTGAATCCTGATTCACACAATTTAACCTCGTTTCAAGGCACATATGGGTATGCTGCACCAGAGATTGCTTACACTATTGAAGTGAACGAAAAATGTGATGTGTTCAGTTTTGGAATGCTTTGTTTGGAAATAATGATGGGAAAGCATCCAGGAGATCTCGTTTCATCGTTATTTTCATCCTCTGAAACATCATCAGCGTATAATTTGCTGTTAAAGGATGTGTTGGACCAAAGGTTACCCCTTCCAGTGAAGCCAGTTCTTGAGGAGGTGATATTGATTGCCAAAATAACATTTGCTTGCTTAAATGAAAGTCCACGTTTTCGTCCAACCATGGAACAAGTGTATAACGATTTTCTCATGCCAAAATCATCTTCTCTCGATTCACTCTCCATCATCACACTTGCTCAACTTGTGAATAATTGA 3069 0.3956 MVFTKLSLIFCSLLGLHFSPLFTIFSFAATTDENQVREAGALLEWKASLENQSQASLSSWSGGVSHCKWKEIICDKSNSVTTINVANHGIKGTLHTLNFSSFPNLLTLDVSDNSFSDTIPHQIANLSRVSQLKMNNNNFSGPIPISMMKLATLKILNLKYNSLSGPLPEEIAELRNLELMLFESNHLSGTIPPTIGRMANLVELNLQHNSINGTIHPSIRNLTNLKFLRLQENSLSGPIPHFIGDMTNLRVLEIDQNRFTGPIPPHIGNLTKMVNMSLASNMLSGPIPPSLGNLVNLEALELAMNNLSGVIPSTLGNLTNPIFFNVLQNKLEGRLPPGMNNFTNLMNLQLGKNSFTGPLPQQICLGGSLIAFSAEDNNFIGPVPISLKNCSTLFRLRLDGNQLSGNISDDFGVYPSLTYIDLSRNNFYGHISPNWAKCPALSSLIMPNNNLSGSIPPELSQAPKLEQLVLSTNHLTGKIPKELGKLTSLLKLSLSNNELSGTIPIEIGALSSLDTLELSANNLDGAIPKQLGELFKLLHLNLSNNRLTESIPLEIDRLQSLESLDLSFNLLNGEISSALASMQRLETLNLSHNNLSGAIPSNFKDVLANVDISNNQLEGPIPNSRAFLNAPFDALKGNKGLCGNVSGLVPCRSRNGKEKRNVTMLALVLTLGALLLVVLVVGVFLCIRYRRAIEGKKEEAKEEKTQEHHAIWSYDGKLVYENIIEATEGFDDKYLIGEGGSASVYKAKLPTGQIVAVKKLNAAPNEETVNLKAFMTEVKALAEIKHRNIVKSLGYCLHPRFSFLVYEFLEGGSLDKVVIDDTRATMFDWNMRVKVVKGVANALYHMHHGCFPPIIHRDISSKNILIDSEYEARISDFGTAKILNPDSHNLTSFQGTYGYAAPEIAYTIEVNEKCDVFSFGMLCLEIMMGKHPGDLVSSLFSSSETSSAYNLLLKDVLDQRLPLPVKPVLEEVILIAKITFACLNESPRFRPTMEQVYNDFLMPKSSSLDSLSIITLAQLVNN* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01515 1022 SUPERFAMILY Protein kinase-like (PK-like) 713 1000 IPR011009 -
Lapu8g01515 1022 Pfam Leucine rich repeat 512 571 IPR001611 GO:0005515
Lapu8g01515 1022 Pfam Protein kinase domain 732 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01515 1022 FunFam MDIS1-interacting receptor like kinase 2 809 1006 - -
Lapu8g01515 1022 Gene3D Ribonuclease Inhibitor 36 315 IPR032675 -
Lapu8g01515 1022 ProSitePatterns Tyrosine protein kinases specific active-site signature. 854 866 IPR008266 GO:0004672|GO:0006468
Lapu8g01515 1022 ProSiteProfiles Protein kinase domain profile. 730 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01515 1022 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 342 655 - -
Lapu8g01515 1022 ProSitePatterns Protein kinases ATP-binding region signature. 736 759 IPR017441 GO:0005524
Lapu8g01515 1022 FunFam Nuclear pore complex protein NUP107 35 193 - -
Lapu8g01515 1022 Gene3D Phosphorylase Kinase; domain 1 691 808 - -
Lapu8g01515 1022 Gene3D Ribonuclease Inhibitor 324 653 IPR032675 -
Lapu8g01515 1022 Pfam Leucine Rich Repeat 584 604 IPR001611 GO:0005515
Lapu8g01515 1022 PANTHER LEUCINE RICH REPEAT KINASE 2 302 1006 - -
Lapu8g01515 1022 SUPERFAMILY L domain-like 376 643 - -
Lapu8g01515 1022 SUPERFAMILY L domain-like 108 475 - -
Lapu8g01515 1022 FunFam Leucine-rich repeat receptor protein kinase MSP1 693 808 - -
Lapu8g01515 1022 FunFam Leucine-rich receptor-like protein kinase family protein 239 337 - -
Lapu8g01515 1022 Gene3D Transferase(Phosphotransferase) domain 1 809 1010 - -
Lapu8g01515 1022 SMART LRR_typ_2 246 270 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 486 510 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 582 605 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 102 126 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 534 557 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 198 222 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 294 317 IPR003591 -
Lapu8g01515 1022 SMART LRR_typ_2 558 581 IPR003591 -
Lapu8g01515 1022 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01515 Lapu-Chr8 32260130 32263320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01515 26 902 Receptor kinase-like Gene Family AT4G08850 44.929 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu8g01515 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01515 - - vra:106762950 1602.03