Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01513 ATGATGTGCACAAAGCTTGTGACATTTCAGCTGATTCTCGTCACGTTTTTCTTTTCACTTTTAAGCCTCTCTTCCTTGGAAGTTTCTGGTGTGTCTATAGTCAATGGTAGTGTTCTGGTTGGCTATGAAGGAGCCGTTGAAGCAAGTGCTCTATTGAAGTGGAAAGCCAGCCTTGATAACCAAAGCCAGGCTTCCTTGTCTTCTTGGTCTACTTTTACTAGCCCTTGCAAGTGGATGGGAATAGTTTGTGATGAATCCAACTCTGTCACCACTATAGATGTTACAAAATTTGGACTAAAAGGTACACTTCTCAATCTCAACTTCTCCTCCTTTCCTAAGCTGCTGAGGTTGTATCTAAGTTACAACAGCCTCAGTGGACCTATTCCCCGCCAAATTGGTAACATGTCCAGAATTTCTCAGTTGAAAATGGATCATAATTATTTTAGCGATTCCATCCCCCAAGAAATAGGGGCACTGCATAACTTGGAGTATCTGTTCTTGAGAGTAAACCAACTTTCTGGTTCCATCCCCTCAACAATTGGAATGTTGAAAAATCTTGTTATACTTGATTTATCATCCAACAATCTCTCTAGTACAATCCCTCCAGTTAGAAACTTGACAAATTTAAAACAATTTATCCTCTTTAACAACATTCTCTCTGGCCCTATTCCTCAGGAGTTGGGAGGACTTCATTTTCTTACAACAATCAAATTGTTACAAAATCATCTTTCCGGGCCAATCCCATCATCTATAGGAGACCTGGCTAATTTGAGGACGCTTCAGCTCAGTGATAATGAACTACATGGATCAATTCCTTCCTTTTTTGGAAACTTGACAAAACTCAGTGAACTGTCCATGTCTAGAAATAAGCTTTCTGGATCAATTCCTGCTTCCATAGGAAACTTGGTCAATCTACAAAAGCTTAGCCTTGCAGAAAACAACCTTTCTGGACCTATTCCCTCTACCTTCAGAAATTTGACAAAGTTTACCTACTTATTACTTCATAGGAACGAACTTACCGGAAGTTTTTCAACAGCAACTAGTAACCTTACCAATTTAGTAAGTTTACAACTAAGCTCGAATCATTTCACTGGCCCTTTGCCACAACATATTTGCCTTGGAGGGTCACTTTCAAATTTTTCCGCCAATGAGAATCATTTCACAGGTCCAATTCCAACAAGTTTGAAGAACTGCTCCAGTCTAAGAAGGCTCAACCTTGCAGAAAATATGCTGACCGGAAATATTTCAAATGATTTTGGTGTATATCCAAATTTGGAGTACATTGATCTGAGTAGAAATGCCTTTGATGGCCACCTTTCATCAAATTGGGCCAAATGCCATAATCTCATAGGCCTAATGATCTCATACAACTATTTATTCGGTGGTATACCCCCAGAGCTGGGCCAGGCACCTAAGTTACAAGAGCTTAAACTGTCTTCAAATCGTCTAACAGGAAAAATTCCAAGAGAACTTGGGAACTTAACCTACTTGTCTAAACTCTCCATAAGTAAGAACAACCTTTCAGGCAACATCCCCATTGAAATTGGTTCCTTAAAGCAACTTCGGTTCTTTGATCTTTCAACAAATAATTTAAGTGGTCCAATCCCAAAACAGCTCGGAAGGTTGCTCAAGTTAACTCACTTGAACTTACGCCATAACAAATTCATGGAAAGCATTCCATCTGAATTTAGCCAATTGCAATATCTTCAAGATCTTGATCTTAGTTGGAATCTTTTAAATGGAAAAATTCCAGCGGCACTTGCAAAATTGAAGATGTTGGAAAACTTGAACCTCTCCCACAACAATCTCTCCGGAAACATTTCTTCCAGTTTTAAGGATATGCCGAGTTTGACAAATGTTGACATGTCTAACAACCAATTAGAGGGTCCAATTCCTGACAATCCAACCTTTCGTAACGGTTCATTTGAAAACAACAAAAACTTGTGTGGCTATGCTTCCGGGTTGATGCCTTGCCCGCAGTTGTTGAGCCACAATCCTCGTGATAAAAAGGCCATGATGTTGGAACTATTCCTTGCTTTGGGTGCACTATTTGTGGTTGGAGTTTCATTATATATTCATTGGCGAAAAGCAAGAAAAATCAAAAAGCAAGAGAAAGAAGAACAAACTCGAGATCTTTTTTCTATATGGCATTATGACGGGAAACTAGTGTATGAAAGTATCATCGAAGCAACAAATGATTTCGATGACAAATATCTCATTGGAGAAGGAGGGTTTGGAGGTGTTTACAAGGCTATCTTACCCTCTGGCCAGATTGTTGCTGTGAAAAAACTTCAGGCTGAAGTTGACAGGGAAATGATTGATTATAAGGCTTTTACAACTGAAATTCGAGCCTTGACAGAAATCAAGCACCGTAACATTGTGAAGTTGCATGGGTTTTGTGAACATCCACGCTATTGCTTCTTGGTTTATGAATTCCTAGAAGGTGGCAGCTTGGATAAAGTACTAAACAACGACACATATGCAGCAACGTTTGATTGGAATAAGAGGGTTAACGTTGTCAAAGGTGTGGCAAATGCTTTGTATCATATGCATCATGGTTGCTCTCCTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGAATATGAAGCTCGCATATCTGACTTTGGAACAGCAAAGATTCTAAATCCCAATTCACGCAACTTAACTTCGTTTGCAGGCACTTATGGATATGCTGCACCAGAGCTTGCCTATACAATGGAAGTGAATGAGAGATGTGATGTGTTCAGTTTTGGAGTGCTTTGTTTGGAAATAATAATTGGAAATCATCCAGGAGACCTCATTTCTTCTGTGCATTCACCCTCTTCAGCAGCAGTGATATCAAATTTGCTATTGAAGGATGTGATAGACCAAAGACTTCCTCCTCCAGTGATGCCAGTAGTTAAGGAGGTGGTCTTCATTGCAAAACAGGCATTTGCTTGTTTGAATGAAAGACCACTTTCTCGTCCAACCATGGAAGATGTGTATAACAAGTTTGTGATGCCTAGATCACCTTTAATGAGGGAGACACTAAACACCATTGTACTTGGACAACTTCAAAATTATTGA 3084 0.3946 MMCTKLVTFQLILVTFFFSLLSLSSLEVSGVSIVNGSVLVGYEGAVEASALLKWKASLDNQSQASLSSWSTFTSPCKWMGIVCDESNSVTTIDVTKFGLKGTLLNLNFSSFPKLLRLYLSYNSLSGPIPRQIGNMSRISQLKMDHNYFSDSIPQEIGALHNLEYLFLRVNQLSGSIPSTIGMLKNLVILDLSSNNLSSTIPPVRNLTNLKQFILFNNILSGPIPQELGGLHFLTTIKLLQNHLSGPIPSSIGDLANLRTLQLSDNELHGSIPSFFGNLTKLSELSMSRNKLSGSIPASIGNLVNLQKLSLAENNLSGPIPSTFRNLTKFTYLLLHRNELTGSFSTATSNLTNLVSLQLSSNHFTGPLPQHICLGGSLSNFSANENHFTGPIPTSLKNCSSLRRLNLAENMLTGNISNDFGVYPNLEYIDLSRNAFDGHLSSNWAKCHNLIGLMISYNYLFGGIPPELGQAPKLQELKLSSNRLTGKIPRELGNLTYLSKLSISKNNLSGNIPIEIGSLKQLRFFDLSTNNLSGPIPKQLGRLLKLTHLNLRHNKFMESIPSEFSQLQYLQDLDLSWNLLNGKIPAALAKLKMLENLNLSHNNLSGNISSSFKDMPSLTNVDMSNNQLEGPIPDNPTFRNGSFENNKNLCGYASGLMPCPQLLSHNPRDKKAMMLELFLALGALFVVGVSLYIHWRKARKIKKQEKEEQTRDLFSIWHYDGKLVYESIIEATNDFDDKYLIGEGGFGGVYKAILPSGQIVAVKKLQAEVDREMIDYKAFTTEIRALTEIKHRNIVKLHGFCEHPRYCFLVYEFLEGGSLDKVLNNDTYAATFDWNKRVNVVKGVANALYHMHHGCSPPIVHRDISSKNVLIDLEYEARISDFGTAKILNPNSRNLTSFAGTYGYAAPELAYTMEVNERCDVFSFGVLCLEIIIGNHPGDLISSVHSPSSAAVISNLLLKDVIDQRLPPPVMPVVKEVVFIAKQAFACLNERPLSRPTMEDVYNKFVMPRSPLMRETLNTIVLGQLQNY* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01513 1027 Gene3D Phosphorylase Kinase; domain 1 694 812 - -
Lapu8g01513 1027 FunFam Leucine-rich repeat receptor protein kinase EMS1 247 346 - -
Lapu8g01513 1027 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 350 662 - -
Lapu8g01513 1027 SMART LRR_typ_2 542 566 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 614 644 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 471 494 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 254 277 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 278 301 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 350 374 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 111 135 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 590 613 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 183 205 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 302 325 IPR003591 -
Lapu8g01513 1027 SMART LRR_typ_2 159 182 IPR003591 -
Lapu8g01513 1027 PRINTS Leucine-rich repeat signature 590 603 - -
Lapu8g01513 1027 PRINTS Leucine-rich repeat signature 186 199 - -
Lapu8g01513 1027 Gene3D Transferase(Phosphotransferase) domain 1 813 1011 - -
Lapu8g01513 1027 Pfam Leucine Rich Repeat 472 494 IPR001611 GO:0005515
Lapu8g01513 1027 ProSiteProfiles Protein kinase domain profile. 734 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01513 1027 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Lapu8g01513 1027 Gene3D Ribonuclease Inhibitor 334 660 IPR032675 -
Lapu8g01513 1027 Gene3D Ribonuclease Inhibitor 45 203 IPR032675 -
Lapu8g01513 1027 SUPERFAMILY RNI-like 319 632 - -
Lapu8g01513 1027 ProSitePatterns Protein kinases ATP-binding region signature. 740 763 IPR017441 GO:0005524
Lapu8g01513 1027 Pfam Leucine rich repeat N-terminal domain 47 84 IPR013210 -
Lapu8g01513 1027 Pfam Protein kinase domain 736 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01513 1027 SUPERFAMILY L domain-like 57 373 - -
Lapu8g01513 1027 Gene3D Ribonuclease Inhibitor 204 254 IPR032675 -
Lapu8g01513 1027 Gene3D Ribonuclease Inhibitor 255 325 IPR032675 -
Lapu8g01513 1027 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515
Lapu8g01513 1027 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Lapu8g01513 1027 ProSitePatterns Tyrosine protein kinases specific active-site signature. 858 870 IPR008266 GO:0004672|GO:0006468
Lapu8g01513 1027 FunFam Leucine-rich repeat receptor protein kinase MSP1 696 812 - -
Lapu8g01513 1027 SMART LRR_sd22_2 302 328 - -
Lapu8g01513 1027 SMART LRR_sd22_2 183 211 - -
Lapu8g01513 1027 SMART LRR_sd22_2 566 598 - -
Lapu8g01513 1027 SMART LRR_sd22_2 159 174 - -
Lapu8g01513 1027 SMART LRR_sd22_2 254 286 - -
Lapu8g01513 1027 FunFam MDIS1-interacting receptor like kinase 2 813 1010 - -
Lapu8g01513 1027 SUPERFAMILY Protein kinase-like (PK-like) 716 1003 IPR011009 -
Lapu8g01513 1027 PANTHER LEUCINE RICH REPEAT KINASE 2 277 1009 - -
Lapu8g01513 1027 FunFam Nuclear pore complex protein NUP107 44 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01513 Lapu-Chr8 32242010 32245659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01513 31 906 Receptor kinase-like Gene Family AT4G08850 44.444 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu8g01513 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01513 - - gmx:100800924 1492.25