Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01509 ATGGCCACAGTGGTGTGGCCCGCAGCCGCCGTAACACTGTTGCTCCTCCTCTGTTCCTCCATCCCAAAATCTGAATCCCAACAAGAGTACGTCAACAACAAACAACTAGATTGCCACAAAAACGACACCAACGCCACAAACGGCAACCTCTGCAACAGTGTTCCATCATGCACATCGTACCTCACCTTCAAATCTTCCATCCCAGATTATACCACCCCTGTCTCCATCTCGTACCTCCTCAACTCCAACGCAACCGCCATCGCCGCCGCAAACAACATCACCGACGTCCAATCCATCTCAGCCGACACCCTCATCACCGTTCCCATCAACTGCTCCTGCTCCGGTTCCTACTACCAGCACAACGCTTCTTACACCCTCAAAATACAGGGCGAAACCTACTTCTCCATCGCCAACAACACCTACCAGTCCCTCACCACCTGTCAGGCTCTCATGGCTCAAAACACCTACGGCGAACAAGACCTCGTTGCAGGTTTCAAACTCCAGGTGCCTCTCAGGTGCGCCTGCCCCACCCAGAACCAGACCGAAGCAGGGTTCAGGTACTTGCTCACTTACTTGGTCTCTCAGGGAGAAACGGTTTCTTCCATTGGTGAAATCTTTGGTGTGGACGAACAGAGCATCCTCGAAGCAAACGGGCTTTCTGATAAATCCGTTATTTTCTACTTCACGCCGATTTCAGTTCCTTTAAAAACAGAGCCACCGACGACTTTACTGAGAGCAGCGGCTCCCCCGGAGGACTCCCCGACGCCGCCGCCTCCTGCGGCGGACGGAGATTCGGACTCTTCCAAGAAATGGGTAATTGTCGGAATCGTTGTTGGGGTTGTTGTGCTGCTTCTTGTCTGTGCTGCTCTGTTTTTCTTCTGTTTCTATCGGCAGCGACGTGTACAACCGCCGTCGCCGACTCCGGCGGCGAAGGCTTTCTCAGACCCCACCCATAAACAGAGCGAAGAAATGACCATTCCGACGACGCAGTCGTGGTCTCTTTCTTCGGAAGGGATTCGTTACGCGATTGAGTCGTTGAGTGTGTACAAGTATGAGGAATTGCAGAAGGCTACGGGTTTCTTCAGTGAAGAGAACAAAATCAAGGGTTCTGTTTATAGGGCTTCTTTCAAGGGTGATTATGCTGCGGTTAAGATTCTCAAAGGGGATGTCTCGGGTGAGATCAACATTCTCAAGAGGATTAACCACTTCAATGTTATAAGATTGTCGGGTTTTTGTGTACACAAAGGTGACACTTATCTGGTTTACGAGTTTGCTGAGAATGATTCTCTGGAAGATTGGCTTCATGGTAATATAAAGTACGAGAATTCGGTGTCTCTGAGTTGGGTGCAGAGGGTTCATATTGCTCATGATGTTGCTGACGCGCTTAATTACCTTCACAACTATACTAGTCCTCCTCATGTGCATAAGAATTTGAAGAGTGGGAACGTGCTTTTAGATGGGAATTTCAGAGCAAAGGTTTCGAATTTTGGGTTGGCGAGAACGGTGGAGGGTGAAGGGGATGATGGGGGATTTCAATTGACAAGGCATGTGGTGGGGACTCAAGGGTACATGTCACCTGAGTATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTCGCGTTTGGGGTTGTGCTTTTGGAGCTTCTTTCGGGGAGAGAGGCTGTTGGTGGAGATAAGAATGGATCTGAGGACCAGATGCTGTCGGTGACTGTGAATCAGGTGCTTGAAGGAGAGAACGTTAAAGCGAAACTTCGAGGTTTCATGGATCCCAATTTGAGAGATGCATATCCTTTAGAACTGGCTTATTCCATGGCTGAACTTGCCAAACGCTGTGTTGCTCGCGACCTCAATTCAAGACCACAGATTTCTGAGGTTTTCATGACTTTGTCTAAGATTCAATCATCTACGTTGGATTGGGATCCGTCTGATGAGCTTGAACTGTCTAGATCTGTCAGCCAAATCTCTGATAGCAGATAA 1983 0.4876 MATVVWPAAAVTLLLLLCSSIPKSESQQEYVNNKQLDCHKNDTNATNGNLCNSVPSCTSYLTFKSSIPDYTTPVSISYLLNSNATAIAAANNITDVQSISADTLITVPINCSCSGSYYQHNASYTLKIQGETYFSIANNTYQSLTTCQALMAQNTYGEQDLVAGFKLQVPLRCACPTQNQTEAGFRYLLTYLVSQGETVSSIGEIFGVDEQSILEANGLSDKSVIFYFTPISVPLKTEPPTTLLRAAAPPEDSPTPPPPAADGDSDSSKKWVIVGIVVGVVVLLLVCAALFFFCFYRQRRVQPPSPTPAAKAFSDPTHKQSEEMTIPTTQSWSLSSEGIRYAIESLSVYKYEELQKATGFFSEENKIKGSVYRASFKGDYAAVKILKGDVSGEINILKRINHFNVIRLSGFCVHKGDTYLVYEFAENDSLEDWLHGNIKYENSVSLSWVQRVHIAHDVADALNYLHNYTSPPHVHKNLKSGNVLLDGNFRAKVSNFGLARTVEGEGDDGGFQLTRHVVGTQGYMSPEYIENGLITPKMDVFAFGVVLLELLSGREAVGGDKNGSEDQMLSVTVNQVLEGENVKAKLRGFMDPNLRDAYPLELAYSMAELAKRCVARDLNSRPQISEVFMTLSKIQSSTLDWDPSDELELSRSVSQISDSR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01509 660 SUPERFAMILY Protein kinase-like (PK-like) 342 631 IPR011009 -
Lapu8g01509 660 ProSiteProfiles Protein kinase domain profile. 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01509 660 SUPERFAMILY LysM domain 189 234 IPR036779 -
Lapu8g01509 660 SMART LysM_2 190 234 IPR018392 -
Lapu8g01509 660 SMART LysM_2 123 170 IPR018392 -
Lapu8g01509 660 CDD LysM 190 226 IPR018392 -
Lapu8g01509 660 MobiDBLite consensus disorder prediction 244 267 - -
Lapu8g01509 660 MobiDBLite consensus disorder prediction 302 327 - -
Lapu8g01509 660 Pfam LysM domain 191 234 IPR018392 -
Lapu8g01509 660 Pfam LysM domain 129 170 IPR018392 -
Lapu8g01509 660 Gene3D LysM domain 189 243 IPR036779 -
Lapu8g01509 660 Pfam Protein kinase domain 389 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01509 660 Gene3D Phosphorylase Kinase; domain 1 325 424 - -
Lapu8g01509 660 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 644 - -
Lapu8g01509 660 Gene3D Transferase(Phosphotransferase) domain 1 425 649 - -
Lapu8g01509 660 FunFam PTI1-like tyrosine-protein kinase 3 425 645 - -
Lapu8g01509 660 ProSiteProfiles LysM domain profile. 189 233 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01509 Lapu-Chr8 32200820 32202808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01509 1 653 Receptor kinase-like Gene Family AT2G33580 52.577 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu8g01509 Pkinase 5.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01509 - - gmx:100818534 995.727