Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01496 ATGGATTCAGTTCACAAGATGGCACAACTTGCCAAAGCATGCACAGAGAGTGATCCACAACAACGTCCAAATATGAGTTCTGTGGTGGTTACTCTCACAGCACTTACTTCAGCTAGCGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAACTCTAGCAAACCTAATAAAAGGGCTGCTGCTGTTATTTTTGTTGCTGGAGTATGTTTGTTGCAATGTTGAAGCAAAGTGTTTGAAGGGTTGTGATGTAGCTTTAGCTTCCTATTATCAGAATCCAGGGCATTTACCCTTGGATAATATGACAAGCTTGATGGAATCAAGTGTTATGTCCAATTCTGACGTTATAATAAGCTACAATAAAGAAAAAATAGTCAATAAAAATGTGCCCTCCTTTGACAGAATTAATATTCCATTTCCCTGTGACTGTATCCGCGAGGAGTTTCTGGGGCATGTGTTTGAGTACTCAGCTGCTGCAGGTGACACCTATGATTCGATTGCCAAAGTGAAATTTGCCAATCTCACCACTGTTGAGCTTTTGAGGAGGTTCAACACTTATGGCGAAAATGGTATACCCACAAATGCCAAGGTTAATGTCACGGTCAATTGTTCTTGTGGGAACAGCCAGGTTTCAAAAGATTATGGGTTATTTATTACCTATCCACTCAGGCCTGGCAACAATTTGCATGATATTGCCAACGAGGCTCATCTTGATGCACAGTTGCTGCAGAATTATAATCCTGGTGTCAATTTCAGCAAAGAGAGTGGGATTGTTTTCATTCCAGGAAGAGATCAACTTGGACACTATGTTCCCTTGCACCCCAGAAACACAGGTCTAGCTAGGGGTGCTGCTGCTGGGGTATCCATAGCAGGAATATGCGGTCTTCTATTATTAGTAATTTGCATATATGTTAAATTCTTCCAGAAGAAGGAAGGAGAGAAACCTAAATTGCCAAAAGAAAATTCTATGGCGTTTTCAACTCAAGATGTCTCTGGAAGTGCAGAATCTGAAACTTCAGGATCCAGTGGGACTGCTACTGCTACTGGCCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCACATATCAAGAACTAGCAAAGGCTACAAATAACTTTAGCTTGGAAAATAAAATTGGTCAAGGTGGATTTGGAGCTGTATATTATGCAGAATTGAGAGGCGAGAAAACTGCAATAAAAAAGATGGACGTGCAAGCATCCACTGAATTTCTTTGTGAGTTGAAGGTCTTAACTCATGTTCATCACTTGAATCTGGTGCGTTTGATTGGATATTGCGTTGAGGGATCTCTTTTCCTTGTATATGAATATATTGACAACGGAAACTTAGGCCAATATTTGCATGGTACAGGGAAAGATCCTTTTCCATGGTCTGGCCGAGTGCAAATTGCGCTAGATTCAGCAAGAGGCCTTGAATATATTCACGAGCACACTGTTCCAGTGTATATCCATCGTGATGTAAAATCTGCAAATATATTAATAGACAAAAACTTCCGTGGAAAGGTAGCAGATTTTGGCTTGACTAAACTTATTGAAGTCGGAGGCTCCACACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGCGACGTTTCTCCCAAAGTAGATGTATACGCTTTTGGAGTGGTTCTTTATGAACTTATTTCTGCAAAGAATGCTGTTCTGAAGACAGGTGAATATGTTGCTGAATCCAAGGGCCTTGTAGCTCTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAGCTATTCGCAAACTGGTGGATCCCAGGCTTGGAGAAAACTATCCAATTGATTCAATTCTCAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAATCCACTACTACGACCAAGTATGAGGTCTATTGTTGTTGCTCTTATGACACTTTCATCGCCTACTGAGGATTTAGACGATGACACTGCTTCCTACGAAAATCAAACTCTCATAAATCTACTGTCTGTGAGATGA 2019 0.4081 MDSVHKMAQLAKACTESDPQQRPNMSSVVVTLTALTSASEDWDIASIIENPTLANLIKGLLLLFLLLEYVCCNVEAKCLKGCDVALASYYQNPGHLPLDNMTSLMESSVMSNSDVIISYNKEKIVNKNVPSFDRINIPFPCDCIREEFLGHVFEYSAAAGDTYDSIAKVKFANLTTVELLRRFNTYGENGIPTNAKVNVTVNCSCGNSQVSKDYGLFITYPLRPGNNLHDIANEAHLDAQLLQNYNPGVNFSKESGIVFIPGRDQLGHYVPLHPRNTGLARGAAAGVSIAGICGLLLLVICIYVKFFQKKEGEKPKLPKENSMAFSTQDVSGSAESETSGSSGTATATGLTGIMVAKSMEFTYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPFPWSGRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGGSTLHTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKNAVLKTGEYVAESKGLVALFEEALNQSNPSEAIRKLVDPRLGENYPIDSILKIAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDLDDDTASYENQTLINLLSVR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01496 672 Gene3D Phosphorylase Kinase; domain 1 353 443 - -
Lapu8g01496 672 FunFam PTI1-like tyrosine-protein kinase 3 444 657 - -
Lapu8g01496 672 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Lapu8g01496 672 ProSiteProfiles Protein kinase domain profile. 373 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01496 672 Gene3D Transferase(Phosphotransferase) domain 1 444 666 - -
Lapu8g01496 672 FunFam LysM receptor kinase 2 352 443 - -
Lapu8g01496 672 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 60 656 IPR044812 GO:0019199|GO:0045087
Lapu8g01496 672 MobiDBLite consensus disorder prediction 316 345 - -
Lapu8g01496 672 SUPERFAMILY Protein kinase-like (PK-like) 354 643 IPR011009 -
Lapu8g01496 672 SMART serkin_6 373 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01496 672 MobiDBLite consensus disorder prediction 321 345 - -
Lapu8g01496 672 Pfam Protein tyrosine and serine/threonine kinase 374 641 IPR001245 GO:0004672|GO:0006468
Lapu8g01496 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01496 Lapu-Chr8 32105705 32116978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01496 55 672 Receptor kinase-like Gene Family AT3G21630 54.167 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu8g01496 PK_Tyr_Ser-Thr 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01496 - K13429 gmx:100792559 1025