Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01469 ATGGGAGATTATCTAGCAACAGCGACTGAAGGACAACCCTTGAGATGTAAAGCTGCGATATGCCGCAAGCCAGGCTCTCCACTGACTATTGAGGAGATCATTGTGGCACCTCCAATGCCTCGTGAAGCTCGGATTCGTATTATATGCACCTCTCTCTGTCATACCGATGTTACTTTTTGGAACACGCAGGTCCCTCCTGGAACCCCTCCAAGAATCTTGGGTCATGAGGCTGTTGGGGTTGTGGAAAGTGTTGGAGAGGATGTAACTGAAGTTACAAAAGGAGATGTGGTTGTCCCAACTTTCATAACTGAGTGTGGGGAGTGTATAGATTGCAAATCAAGCAGGAGCAATCTTTGTTCGAAGTTTCCATTTGAGTTCTCTTCTTGGATGCCTAGATATGCCACATCAAGATTCAAGGATTCAAATGGAGAGATCATACATCATTTCATGTTTGTTTCTAGTTTCAGTGAGTACACTGTGGTTGACATAGCCAACCTAACCAAGATTGATCCGGCAATACCACCCAGCACGGCATGCATAATTAGTTGTGGTGTAGGGACCGGAGTAGGTGCTGCTTGGAAAGCTGCAGGTGTGGAGCCAGGCTCCACAGTCGCTATTTTTGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGACTTTGTGGAGCAGCCAAGATTATAGGTGTGGATGTCAACCCAGAAAAACATGAAGTTGGAAAAAAGTTTGGAGTCACTGACTTTGTCCATTCTGGAGCAAGTAAAGACAAATCTGTGAGCCAGATTATCATGGAGATGACTGGTGGGGGAGCAGACTATTGCTTCGAATGTGTTGGCTTGACATCATTGATGGAAGAAGCATATGATTCTTGTAGAAAGGGTTGGGGGCAAACAATAGTTATAGGATTGGCTAAGTCAGGATCCAAGATGAGCGTTAGCACTACTGAGCTACTGCTTAGTTGCAAGAACCTCACGGGATGCTTATTTGGAGGACTCAAACCTAAGTCTGATGTACCTACTCTCCTTAAACGCTACATGAACAAGGAACTGAATTTGGATGATTTTGTCACACATGAGGTGCAGTTTCAAGATATCAATAAGGCTTTTGATTTATTGATTGAAGGAAAGAGTCTCAGATGTGTGATTTGGATGGACAAATGA 1164 0.4442 MGDYLATATEGQPLRCKAAICRKPGSPLTIEEIIVAPPMPREARIRIICTSLCHTDVTFWNTQVPPGTPPRILGHEAVGVVESVGEDVTEVTKGDVVVPTFITECGECIDCKSSRSNLCSKFPFEFSSWMPRYATSRFKDSNGEIIHHFMFVSSFSEYTVVDIANLTKIDPAIPPSTACIISCGVGTGVGAAWKAAGVEPGSTVAIFGLGSIGLAVAEGARLCGAAKIIGVDVNPEKHEVGKKFGVTDFVHSGASKDKSVSQIIMEMTGGGADYCFECVGLTSLMEEAYDSCRKGWGQTIVIGLAKSGSKMSVSTTELLLSCKNLTGCLFGGLKPKSDVPTLLKRYMNKELNLDDFVTHEVQFQDINKAFDLLIEGKSLRCVIWMDK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01469 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 328 - -
Lapu8g01469 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Lapu8g01469 387 Gene3D - 188 328 - -
Lapu8g01469 387 PANTHER ALCOHOL DEHYDROGENASE 11 383 - -
Lapu8g01469 387 Pfam Zinc-binding dehydrogenase 212 344 IPR013149 -
Lapu8g01469 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 349 IPR036291 -
Lapu8g01469 387 SUPERFAMILY GroES-like 9 193 IPR011032 -
Lapu8g01469 387 Gene3D - 19 380 - -
Lapu8g01469 387 FunFam Alcohol dehydrogenase 6 19 199 - -
Lapu8g01469 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Lapu8g01469 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01469 Lapu-Chr8 31907616 31911084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01469 7 375 Monolignol Biosynthesis Gene Families AT1G72680 22.691 1.01e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01469 K00121 - gmx:100806887 655.981