Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01465 ATGCTTGGAGTAGGAGCTACTAGGAAAGGCATGCAGGCTATCTGGTTGATGTTATTGTTGTTGGTGGCTATTGCATTGGGGAATTCAGATATTGATGCTCTCCTTGAATTTAAGAAAAGTATTCAGAATGACCCTTCTGGATTAATTTTTAATTCTTGGAATTCCAAGTCTTTAGATTCTGATGGATGTCCTAGGAAATGGTATGGAATACGGTGTAGTGAAGGCAGTGTTATATCAATCACACTGGACAATGCTGGTTTGGTTGGTGAGTTTAATTTCCCTGCGATTAGTGGCCTTGCAATGCTTCGCAATTTGTCAGCTGTGAACAACCTGTTCACAGGAGAGCTCTCACATGCTTCTGCTACAATGGAATCACTTGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGACCGTTACTCTCTAACTTCGTTCAGTTGCGCAAGTTAGTTTATCTGAATCTTTCTTCTAATGAACTTGGAGGCACTCTTACTATTGAGTTTCACAAACTTGAGCATTTGAAGTATTTAGATTTGCACATGAATAACTTTTCTGGGGATATTATGCACATCTTCTATCAGATGGGCAGTGTGCCATATGTTGACTTAAGCAGCAACAGGTTCTCTGGTGCACTGGATTTGGGACTTGTAGATGAATCTTTTCTCTCCTCAATTCAATATTTAAATGTTAGCCATAATTCCTTGAGTGGTGAGTTATTTGTTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAGGGTAGTATACCTTCCTTTACTTTTGTGGTATCTCTTCGGATTCTTCGACTTGCATTCAACCAGCTGACTGGTTTGCTGCCTGAAGCTCTATTGAAGGAAAGTTCAATGATGTTGTCGGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCCATTGGAATTATTACCTCGGTGACTCTTAGGAAGCTTAATTTATCTTCAAACAAATTGTCTGGGCCCTTACCTCTCAGGGTAGGCCACTGTGCCATCGTAGATTTGAGTAATAACACACTATCAGGCAATTTCTCAAGGATTGGGTATTGGGGTAACTACGTGGAAGTTGTTCAGCTAAGTACCAACACATTGATAGGAATGCTGCCAAACGAAACTTCTCAATTTTTAAGGTTAACTGAGCTTAAGGTATCCAATAACTTATTGGAAGGCTTTCTTCCACCAATTTTGGGAACATATCCAGAACTAAAGGAGATTGATCTTAGTCTCAATCAGCTTTCTGGGTCCCTCCTACCAAGCTTTTTTGCCTCAACCGAATTGATTAATCTTAATCTCTCCAACAATAAGTTTTCTGGATCAATTCCTATTCAATCTCAACCTCCAAATACTCCAATAGTTTCTACTGAAAATATTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGACTCTTCCTTCAAATATGAGCAGGCTTCAGAATTTGGCATATCTCAATTTATGCAACAACAAATTGGAAGGTACTATTCCTGATCACCTTCCAGATGAGTTGCAAGTATTCAATGTGTCCTTCAATAATTTTTCTGGTGTTGTACCAGAAAACTTAAAGCAGTTTCCTGAATCTGCATTTCATCCAGGAAATACTATGCTGGTGTTTCCTCATTCGCAATCATCGCCAAAAGATACTTCCAACCTAGGTTTGAGGGAACATCGGTTACATAAAAGGTCTGCCACTAGGATTGCCCTGATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGCTATTGTGGGCATAGTAATTTATTATAAGGTTCATCATGAAGAAGAAAGGACTTCTAAGCAAAATGAAGCAAGAGGCATCACTCAAGATAGTACTTTCCCATCAAATTTAGATGCAGCTTACAGAAATTTGGAAGCATTACCACCTTCTCAAAGGGGCTCTTCTGATGCTTCAAGAAACATTCATCCAGTGGGAGAGAAGCCTATGGATCTTGGCCGTGGTGAATTAGCTAAGAACGAGGAAGGAATGTATTCTCCAATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAGAATCCTGGTTCCCTCCAAGTATCCTCTCCCGATAAACTGGTGGGAGACTTGCACATATTTGATGGGTCCTTGGTACTAACTGCGGAAGAACTTTCATGTGCTCCAGCTGAAGTTATTGGCAGGAGCTGTCATGGAACACTTTACAAAGCGACACTTGACTCTGGTCATGCATTGGCTGTCAAATGGTTAAGAGAAGGAATAACCAAAGGAAAAAAGGAGTTGGCTAGGGAAATAAAAAAACTGGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTATCTGGGGCCAAAAGAACATGAGAAACTGATCATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCATGAAGTAGATAAAACAAATCTCCATCCTTTGTCTCTTGATGAAAGGCTGAGGGTGGCTATAGAGGTGGCACTATGTCTGCATTTCTTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACTAATATTCTGCTAGAAACTCCCAACAGAAATGTCCTCCTCACAGACTACAGCCTGCACAGGATACTCACTGCTGCAGGTACTACCGAGCAAGTTCTGAATGCTGGTGCACTCGGCTACCGGCCTCCAGAGTTTGCTAGATCAAGCAAACCATGCCCTTCTTTGACAAGTGATGTCTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGGATTCCAGGGGTGGTTGACCTCACTGACTGGGTGAGGTTTTTGGCAGAACAAGACCGTTCAAAGCAGTGCTTTGATAGGTCTCTAGTGGACAAGCATAATGGGGAAAGACCATCTAAAGTTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGGCCTGACATGAAAACCGTCTTTGATGATCTCTCAACAATAAGCTCTCAACAGGCATTATAA 3060 0.4082 MLGVGATRKGMQAIWLMLLLLVAIALGNSDIDALLEFKKSIQNDPSGLIFNSWNSKSLDSDGCPRKWYGIRCSEGSVISITLDNAGLVGEFNFPAISGLAMLRNLSAVNNLFTGELSHASATMESLEYLDLSLNKFNGPLLSNFVQLRKLVYLNLSSNELGGTLTIEFHKLEHLKYLDLHMNNFSGDIMHIFYQMGSVPYVDLSSNRFSGALDLGLVDESFLSSIQYLNVSHNSLSGELFVHDGMPYLDNLEVFDASNNQLEGSIPSFTFVVSLRILRLAFNQLTGLLPEALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNKLSGPLPLRVGHCAIVDLSNNTLSGNFSRIGYWGNYVEVVQLSTNTLIGMLPNETSQFLRLTELKVSNNLLEGFLPPILGTYPELKEIDLSLNQLSGSLLPSFFASTELINLNLSNNKFSGSIPIQSQPPNTPIVSTENISLVFLDLSHNNLSGTLPSNMSRLQNLAYLNLCNNKLEGTIPDHLPDELQVFNVSFNNFSGVVPENLKQFPESAFHPGNTMLVFPHSQSSPKDTSNLGLREHRLHKRSATRIALIACLVAGAFVMAIVGIVIYYKVHHEEERTSKQNEARGITQDSTFPSNLDAAYRNLEALPPSQRGSSDASRNIHPVGEKPMDLGRGELAKNEEGMYSPMSILSPSNPSSSKSHQFENPGSLQVSSPDKLVGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHALAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEVDKTNLHPLSLDERLRVAIEVALCLHFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTAAGTTEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSKQCFDRSLVDKHNGERPSKVLDDMLKVALRCILPASDRPDMKTVFDDLSTISSQQAL* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01465 1019 Gene3D Ribonuclease Inhibitor 29 147 IPR032675 -
Lapu8g01465 1019 Gene3D Ribonuclease Inhibitor 148 218 IPR032675 -
Lapu8g01465 1019 Gene3D Ribonuclease Inhibitor 219 562 IPR032675 -
Lapu8g01465 1019 SUPERFAMILY Protein kinase-like (PK-like) 734 1010 IPR011009 -
Lapu8g01465 1019 Pfam Protein tyrosine and serine/threonine kinase 735 1009 IPR001245 GO:0004672|GO:0006468
Lapu8g01465 1019 Gene3D Phosphorylase Kinase; domain 1 737 809 - -
Lapu8g01465 1019 ProSiteProfiles Protein kinase domain profile. 731 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01465 1019 PANTHER OS07G0626500 PROTEIN 15 110 - -
Lapu8g01465 1019 FunFam Nuclear pore complex protein NUP107 27 190 - -
Lapu8g01465 1019 SUPERFAMILY L domain-like 344 539 - -
Lapu8g01465 1019 SUPERFAMILY L domain-like 42 343 - -
Lapu8g01465 1019 MobiDBLite consensus disorder prediction 680 705 - -
Lapu8g01465 1019 MobiDBLite consensus disorder prediction 641 666 - -
Lapu8g01465 1019 FunFam Leucine-rich repeat receptor-like protein kinase 716 808 - -
Lapu8g01465 1019 MobiDBLite consensus disorder prediction 679 705 - -
Lapu8g01465 1019 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Lapu8g01465 1019 Gene3D Transferase(Phosphotransferase) domain 1 810 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01465 Lapu-Chr8 31872891 31877861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01465 225 540 Receptor kinase-like Gene Family AT1G55610 31.548 4.82e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g01465 PK_Tyr_Ser-Thr 9.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01465 - - gmx:100809980 1756.11