Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01456 ATGTGTGCACATGCTGGAATGATAGGTACTAGCAGACCTGCACACTATCATGTTCTGTTGGATGAGATTGGGTTTTCACCCGATGATCTGCAGGAGCTTGTACACTCCTTATCATACGTGTATCAGAGGAGCACCACGGCCATATCTGTCGTTGCTCCAATCTGTTATGCTCACTTGGCTGCTACTCAGATGGGTCAGTTTATGAAATTTGAGGAAAGATCGGAGACTGCTTCTAGTCATGGTGGTGCTCACCCTGTCCCTCAATTGCCTAGATTGAATGATAATGTCTCTAGCTCAATGTTCTTTTGCTGA 312 0.4551 MCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHGGAHPVPQLPRLNDNVSSSMFFC* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01456 103 ProSiteProfiles Piwi domain profile. 1 69 IPR003165 GO:0003676
Lapu8g01456 103 Gene3D - 1 103 IPR036397 GO:0003676
Lapu8g01456 103 SUPERFAMILY Ribonuclease H-like 1 67 IPR012337 -
Lapu8g01456 103 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 71 - -
Lapu8g01456 103 Pfam Piwi domain 1 69 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01456 Lapu-Chr8 31804310 31805718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01456 1 103 Eukaryotic Initiation Factors Gene Family AT5G43810 42.342 7.22e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01456 K11593 - gmx:100792105 195.667