Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01455 ATGTCTTTCCCACCACCTGCTATTCCATCAGATGCTGTGCTTGTCAAAATGGAGCCTAAAAAGAAAACGGTTTTGAGGCTTCCCATGGCCAGGCGTGAGCTTGGTTCAAGAGGGAGCAAGTTGCAATTTCAAACCAATCATTTCAGAGTCAATGTTGGAGACACTGATGACGATTACTTCTATCAGTACAGTGTGTCTCTTTCTTATGAAGATGGACATCATGTAGAGGGCAAGGGCGTAGGGAGAAAGGTGTTCGACAAGTTGCAGGATACATACAATTCTGTATTAAACGGGAAGGATTTTGCTTATGATGGGGAGAAAACTCTTTTTACACTTGGCTCTCTAGCCCACAAGAATCTCGACTGTACTGTTGCTATTCTGGAGGATACTGTTGTTTCTACTAGCAGCCATGATAGAAATCGAAAAAGTGAGACTGACAAGAAGAGGAAGAGGATGAATCGCTCAAATAGTGCCAAAATTATTAAAGTTCGAATATCTTTTGCTTCAAAGATTTCATTACAAGCCATCGTCAATGCTTGCCGTGGACAGGACTCTGATCAAGAAGCGATAAGGGTTCTTCATATCATTCTGAGGCAACATGCGGCTAAACAAGGTTGTTTGCTTGTGCGCCAGTTGGTCTTCCATAATGATCCGAAGAATTTTGATGATGTTGGAACAGGGGCACTTAGCTGCAGGGGCTTTCGTTCTAGTTTTAGAACCACACAGAGTGGCTTGTCACTGAACATAGATGTCTCAACCACAACGATAGTTACTCCTGGGCCGGTGTTGGACTTCCTCAAATCCAATCAGCGTCTAAAAAATCCACTTTTTCTGGACTGGGGAAAGGCCAAGAGGGCACTGAAAAAGTTGAGGATTAAAACAAGTACATCCAATCATGTATATAAGATTACTGGGCTCAGTGACCACACATGCAAAACTCAAATGTTTACATTGAAGAAAAAGGGCGAAGTGGATGGTAATGATGATACTAAGGAGGTGAGTGTGTACGATTATTTTGTTAACCATCGAAACATACCTCTCAGTTCCTCAGTGGATCTCCCATGTATTAATGTTGGAAAGTCCAAGCGGCCAACATATTTTCCTCTTGAGCTTTGCTCTTTGGTGTCCCTTCAACGTTACACTAAAGCTCTAACAAAAAACCAAAGGTCCTCATTTGAGGAGAAATCTAGACAGACGCCGCAGGAGAAGATGGGAGTCTTGACAGATGCTTTGAGTGTCTGCAAGTATGATTCTGAACCTATGCTTCGAAATTGTGGTATTTCTATCAACCCTGGCTTTACTGAAGTAGAAGGTCGAGTTTTACAAGCTCCACGGTTAAAGGTTGGAGGAGCGAAGTGCTTTAATCCAAAAAATGGGAAGTGGAACTTCATTGATAAGGAATTTATTAAGCCATCAAAAATTGGAACATGGTATGTGGTAGACTTTTCTGGGCGACGTGATCTAGACAACCTTGTGGATGATTTCATCAAGTGTGGTCAAAAGAGAGGAATTACTATCAACCAGCCTAGTGATACAATCCGAGAAAGATTTACCAATAAATCTTCTTTACCTCAGGATAGAGTGGAGAAAATGTGTAACATCATACATTCTAAATTTTCTGAGGCTCCAAAATTTCTTCTGTGTCTACTTCCTGTTAAAAAAAATTCGGAACTTTATGGTCCATGGAAGAGAATAGTTCTCGCTCAATGGGGAATTGTTACCCAGTGTATAGCTCCACCATCAAGGGTCAATGATCAATATTTAACTAATGTTTGGTTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCAGTGTTAAGCGATGAAGTTAGTTGTTCCATCCCTGTTGTTTCCAGAGTTCCCACCATCATTATTGGTATGGATGTTTTACATGGCTCGCTAGGGCAGACACACATTCCTTCAATTGCAGCGGTGGTTGGCTCTCGATGCTGGCCCAGAATATCAAAGTATAGGGCATGTGTCCGCACCCAGTCTCCCAAAGTTGAAATGATTGACAATTTGTTTCATAAAGTCTGTAAAGAGAACTCCAGGGCCACGCTGCGAGAGCGGGATGACGGCATGATTCAACAACTGCTGAAGGATTTCTATACAAGTTCTGGGAACATAAAGCCTGAAAATGTTATCATCTTCAGGAACGGGGTTAGTGAATCTCAGTTCAAGCAAGTTTTAAACCTAGAGCTTAATCAAATTATCGAGGCTGCCAAGTATATGGATCCTGAGTGGAATCCCAAATTTTTGGTTATTGTTGCTCAAAAGAACCATCATACTAGATTCTTTCAACCCGGGTCTCTTGATAATGTTCCTCCTGGAACCGTAGTTGATAACGCAATTTGTCATCCTCAGAATTATGATTTTTACATGTGTGCACATGCTTCAAAAATGGGTACTAGTAGACCTACACACTATCATGTTCTGTTGGATGAGATTGGGTTTTCGGCCAACGATCTGCAAGAGCTTGTGCATTCCTTATCATACGTGTATCAGCGGAGCACCTCGGCCATATCTGTGGTTGCTCCAATCTATTACGCTCACTCCGCTGCTACTCAGATGGCAGAGATTATGAAATCCGAGGAAAGAATGGGGACAGGTGATGCTGACCGTGTTCCTCAATTGCCTCCATTGAAAGAGAATATCTCTGAATCAATGTTCTTTTGCTGA 2679 0.4199 MSFPPPAIPSDAVLVKMEPKKKTVLRLPMARRELGSRGSKLQFQTNHFRVNVGDTDDDYFYQYSVSLSYEDGHHVEGKGVGRKVFDKLQDTYNSVLNGKDFAYDGEKTLFTLGSLAHKNLDCTVAILEDTVVSTSSHDRNRKSETDKKRKRMNRSNSAKIIKVRISFASKISLQAIVNACRGQDSDQEAIRVLHIILRQHAAKQGCLLVRQLVFHNDPKNFDDVGTGALSCRGFRSSFRTTQSGLSLNIDVSTTTIVTPGPVLDFLKSNQRLKNPLFLDWGKAKRALKKLRIKTSTSNHVYKITGLSDHTCKTQMFTLKKKGEVDGNDDTKEVSVYDYFVNHRNIPLSSSVDLPCINVGKSKRPTYFPLELCSLVSLQRYTKALTKNQRSSFEEKSRQTPQEKMGVLTDALSVCKYDSEPMLRNCGISINPGFTEVEGRVLQAPRLKVGGAKCFNPKNGKWNFIDKEFIKPSKIGTWYVVDFSGRRDLDNLVDDFIKCGQKRGITINQPSDTIRERFTNKSSLPQDRVEKMCNIIHSKFSEAPKFLLCLLPVKKNSELYGPWKRIVLAQWGIVTQCIAPPSRVNDQYLTNVWLKINAKLGGLNSVLSDEVSCSIPVVSRVPTIIIGMDVLHGSLGQTHIPSIAAVVGSRCWPRISKYRACVRTQSPKVEMIDNLFHKVCKENSRATLRERDDGMIQQLLKDFYTSSGNIKPENVIIFRNGVSESQFKQVLNLELNQIIEAAKYMDPEWNPKFLVIVAQKNHHTRFFQPGSLDNVPPGTVVDNAICHPQNYDFYMCAHASKMGTSRPTHYHVLLDEIGFSANDLQELVHSLSYVYQRSTSAISVVAPIYYAHSAATQMAEIMKSEERMGTGDADRVPQLPPLKENISESMFFC* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01455 892 ProSiteProfiles Piwi domain profile. 545 862 IPR003165 GO:0003676
Lapu8g01455 892 SMART Piwi_a_2 545 862 IPR003165 GO:0003676
Lapu8g01455 892 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 28 864 - -
Lapu8g01455 892 CDD Piwi_ago-like 420 856 IPR045246 -
Lapu8g01455 892 ProSiteProfiles PAZ domain profile. 284 376 IPR003100 GO:0005515
Lapu8g01455 892 SMART DUF1785_2 207 259 IPR014811 -
Lapu8g01455 892 CDD PAZ_argonaute_like 259 375 - -
Lapu8g01455 892 FunFam Protein argonaute 3 614 892 - -
Lapu8g01455 892 Pfam Argonaute linker 2 domain 403 447 IPR032472 -
Lapu8g01455 892 Pfam Argonaute linker 1 domain 214 257 IPR014811 -
Lapu8g01455 892 Gene3D - 613 892 IPR036397 GO:0003676
Lapu8g01455 892 Gene3D paz domain 253 380 - -
Lapu8g01455 892 SUPERFAMILY Ribonuclease H-like 529 860 IPR012337 -
Lapu8g01455 892 SUPERFAMILY PAZ domain 254 416 IPR036085 GO:0005515
Lapu8g01455 892 Pfam N-terminal domain of argonaute 43 197 IPR032474 -
Lapu8g01455 892 Pfam PAZ domain 263 391 IPR003100 GO:0005515
Lapu8g01455 892 Gene3D - 440 608 - -
Lapu8g01455 892 MobiDBLite consensus disorder prediction 135 154 - -
Lapu8g01455 892 MobiDBLite consensus disorder prediction 135 151 - -
Lapu8g01455 892 Pfam Piwi domain 546 861 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01455 Lapu-Chr8 31794831 31800228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01455 31 892 Eukaryotic Initiation Factors Gene Family AT5G43810 34.505 5.89e-149 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01455 K11593 - gmx:100779439 1167.53