Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01453 ATGCAGGATATGTCTTCTATCGGGACAAATGGAACTGAGAATGAGGATTCTCTGCCTCCACCACCGCCTGTTATCCCATCAGATGTTGTACCTGTCAAAGTGGAGCCCGAAAAGAAAAAGGTTTTGAGGCTTCCAATAGCCAGGCGTGGCCTTGCTTCTAAAGGGACAAAGTTGCGACTTCTCACGAATCACTTTAGAGTGAATGTTGGAAACACTGACGGCCACTTTTTCCAATATAGTGTATCTCTTTCTTATGAAGATGGACGTCCTGTAGAGGGTAAGGGTGTAGGGAGGAAGGTACTCGACAGAGTGCAGGAGACATATGATTCTGAATTGAACGGGAAGGATTTTGCTTATGACGGCGAGAAAACTCTTTTTACACTTGGCTCTCTTGCCCGCAACCGACTTGAGTTTACTGTTGTTCTTGAGGATGTTGTTTCTACTGGCAGAAATAATGGAAATGTCAGCCCTGATGGAAATGGAGAATTTAATGAGAATGACAAGAAAAGAATGAGGCGCCCAAATAGAGCCAAAACTTTTAAAGTCGAGTTAAGTTTTGCTTCAAAGATTCCATTGCAGGCCATTGTCAATGCTCTCCGTGGGCAGGAATCTGATAATTACCAAGAAGCAATAAGAGTTCTTGATATCATTCTGAGGCAGCATGCTGCTAAACAAGGCTGTTTGCTTGTGCGCCAGTCATTCTTCCACAATGATCCGAAGAATTTTGCTGATGTAGGAGGAGGTGTACTTGGCTGCAGGGGATTTCATTCTAGTTTTAGAACCACACAGAGTGGCTTGTCACTTAACATAGATGTCTCCACCACAATGATAGTTACTCCTGGGCCTGTGGTGGACTTCCTAATTTCCAATCAGAATGTAAAAGATCCATTTTCTCTGGATTGGGTAAAGGCCAAGAGGACACTGAAAAATTTGAGGATTAAAGCAAGTCCATCCAATCAAGAGTATAAAATCACTGGGCTTAGTGACCTCCCTTGCAAAGACCAACTGTTTACATTGAAGAAAAAGGGTGGAGTGGATGGTGAAGATACTGAGGAGGTTACTGTGTATGATTATTTTGTTAATCATCGGAACATAGATCTTCGTTACTCTGGGGATCTCCCATGTATTAATGTTGGAAAGCCCAAGCGACCAACATATTTTCCTATTGAGCTTTGCTCTTTGGTATCCCTTCAACGTTACACTAAAGCTCTATCCACTCTCCAAAGGGCCTCATTGGTGGAGAAGTCGAGGCAGAAGCCACCAGAGAGGATGAGAGTTTTGACAGATGCTTTGAGTCAAAGCAATTATGGTTCTGAGCCTATGCTTCGCAATTGTGGTATTTCTATCAGCTCTGGCTTCACTGAAGTAGAAGGTCGAGTACTACAAGCTCCAAGGTTAAAGTTTGGAAATGGGGAGGACTTCAACCCAAGAAATGGGAGGTGGAACTTCAATCAAAAGAAATTAATTAAGCCAACAAAAATTGAACGATGGGCTGTGGTTAACTTTTCTGCTCGATGTGATGTACGAGGACTTGTTAGGGATCTCCTCAAGTGCGGTCAAATGAAAGGAATTGCGATTGAACCACCTTTTGATGTATTTGAAGAAGATTTTCGCAATAAACGATCTCCACCTCTTGTTAGGGTGGAGAAAATGCTCGAATTGGTGCAGTCTAAACTTCCTGGGGCTCCACAATTTCTTCTTTGTCTGCTTCCTGATAGAAAAAATTCTGATCTTTATGGTCCGTGGAAGAAGAGGAATCTTGCTGATTTCGGAGTTGTTACCCAGTGTATAGCTCCTCAAAAGGTCAATGATCAGTATTTAACTAATGTTTTATTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCAATGTTAGGCGTTGAGCACGCCCCTTCCATCCCTGTTGTTTCCAGAGCTCCCACCATCATTATTGGCATGGATGTTTCTCATGGCTCCCCAGGGCAAACCGATATTCCTTCTATTGCAGCGGTGGTTAGCTCTCGAGAGTGGCCTCTAATATCGAAGTATAGGGCATGTGTCCGTACGCAGTCTCCGAAGGTTGAAATGATTGACAATTTGTTTAAGAAAGTCTCTGAAGGGGTGGATGATGGCATAATTAGGGAACTACTGATAGATTTCTATAAAAGTTCTGGAAATAGAAAGCCTGAAAATATAATCATATTCAGGGACGGTGTTAGTGAGTCTCAGTTCAATCAAGTTTTAAACATCGAACTTGATCAAATCATTGAGGCTTGCAAGTTTTTAGATGAGAAGTGGAATCCCAAATTTTTGGTTATTGTTGCTCAAAAGAACCATCATACTAAATTCTTTCAAGCCGGTTCTCCTGACAATGTTCCTCCTGGAACTGTAATTGATAACAAAATTTGTCATCCTCGGAACTATGATTTTTACATGTGTGCACATGCTGGAATGATAGGTACTAGCAGACCTACCCACTATCATGTTCTGTTAGATGAGATTGGGTTTTCACCCGATGATCTGCAGGAGCTCGTACACTCATTGTCATACGTGTATCAGAGGAGCACCACGGCCATTTCTGTCGTTGCTCCAATCTGTTATGCACACTTGGCTGCTACTCAGATGGGTCAGTTTATGAAATTTGAGGAAAGATCGGAGACTGCTTCTAGTCATGGTGGTGCTCACCCTGTCCCTCAATTGCCTAGATTGAATGATAATGTCTCTAGCTCAATGTTCTTTTGCTGA 2724 0.4247 MQDMSSIGTNGTENEDSLPPPPPVIPSDVVPVKVEPEKKKVLRLPIARRGLASKGTKLRLLTNHFRVNVGNTDGHFFQYSVSLSYEDGRPVEGKGVGRKVLDRVQETYDSELNGKDFAYDGEKTLFTLGSLARNRLEFTVVLEDVVSTGRNNGNVSPDGNGEFNENDKKRMRRPNRAKTFKVELSFASKIPLQAIVNALRGQESDNYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVTPGPVVDFLISNQNVKDPFSLDWVKAKRTLKNLRIKASPSNQEYKITGLSDLPCKDQLFTLKKKGGVDGEDTEEVTVYDYFVNHRNIDLRYSGDLPCINVGKPKRPTYFPIELCSLVSLQRYTKALSTLQRASLVEKSRQKPPERMRVLTDALSQSNYGSEPMLRNCGISISSGFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNQKKLIKPTKIERWAVVNFSARCDVRGLVRDLLKCGQMKGIAIEPPFDVFEEDFRNKRSPPLVRVEKMLELVQSKLPGAPQFLLCLLPDRKNSDLYGPWKKRNLADFGVVTQCIAPQKVNDQYLTNVLLKINAKLGGLNSMLGVEHAPSIPVVSRAPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSEGVDDGIIRELLIDFYKSSGNRKPENIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQAGSPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEERSETASSHGGAHPVPQLPRLNDNVSSSMFFC* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01453 907 SMART Piwi_a_2 565 873 IPR003165 GO:0003676
Lapu8g01453 907 Gene3D - 632 907 IPR036397 GO:0003676
Lapu8g01453 907 MobiDBLite consensus disorder prediction 1 15 - -
Lapu8g01453 907 SUPERFAMILY PAZ domain 275 436 IPR036085 GO:0005515
Lapu8g01453 907 CDD Piwi_ago-like 440 867 IPR045246 -
Lapu8g01453 907 MobiDBLite consensus disorder prediction 1 29 - -
Lapu8g01453 907 CDD PAZ_argonaute_like 280 395 - -
Lapu8g01453 907 Pfam PAZ domain 284 412 IPR003100 GO:0005515
Lapu8g01453 907 MobiDBLite consensus disorder prediction 151 171 - -
Lapu8g01453 907 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 52 875 - -
Lapu8g01453 907 SUPERFAMILY Ribonuclease H-like 549 871 IPR012337 -
Lapu8g01453 907 FunFam Protein argonaute 7 275 400 - -
Lapu8g01453 907 Pfam Piwi domain 566 873 IPR003165 GO:0003676
Lapu8g01453 907 Gene3D - 460 626 - -
Lapu8g01453 907 Pfam N-terminal domain of argonaute 57 218 IPR032474 -
Lapu8g01453 907 Gene3D paz domain 274 400 - -
Lapu8g01453 907 Pfam Argonaute linker 2 domain 422 468 IPR032472 -
Lapu8g01453 907 FunFam Protein argonaute 3 633 907 - -
Lapu8g01453 907 SMART DUF1785_2 228 280 IPR014811 -
Lapu8g01453 907 Pfam Argonaute linker 1 domain 230 277 IPR014811 -
Lapu8g01453 907 ProSiteProfiles PAZ domain profile. 300 396 IPR003100 GO:0005515
Lapu8g01453 907 ProSiteProfiles Piwi domain profile. 565 873 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01453 Lapu-Chr8 31772311 31779292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01453 48 907 Eukaryotic Initiation Factors Gene Family AT5G43810 35.730 7.68e-165 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01453 K11593 - gmx:100779439 1622.45