Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01442 ATGGTCATACTGGAGACAACACGCATGTTTATTGGAACTCATGGTTATGCTACACCAGAGTATGTAGCTACTGGTCATTTGACCCGAAGGAGTGATGTATACAGCTTTGGAGTTGTATTGTTAGAGTTACTAACAAGAAGGCGTGCAGTAGATGAGAGGCCTGGATTTTCAGAAGAAACACTGGGGGATTAG 192 0.4323 MVILETTRMFIGTHGYATPEYVATGHLTRRSDVYSFGVVLLELLTRRRAVDERPGFSEETLGD* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01442 63 Gene3D Transferase(Phosphotransferase) domain 1 3 62 - -
Lapu8g01442 63 PANTHER OS01G0588500 PROTEIN-RELATED 6 55 - -
Lapu8g01442 63 ProSiteProfiles Protein kinase domain profile. 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01442 63 SUPERFAMILY Protein kinase-like (PK-like) 6 53 IPR011009 -
Lapu8g01442 63 Pfam Protein kinase domain 7 51 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01442 Lapu-Chr8 31650350 31651549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01442 6 61 Receptor kinase-like Gene Family AT3G58690 58.929 1.17e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu8g01442 Pkinase 6.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01442 - - gmx:102664409 92.0485