Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01423 ATGGCTTCCATAGCGGAACAGCCCATCAATGGTGAGATTCGTGAGAACAAGCAGAAGAATGTGGGTGGTGAAGGAAGAAACAGAAGGGTTCTTCAGGACATCGGGAATCTTGTGGCCAAACAAGGCCATGGTGGTATTAATGTGTCTAAACCCGTCACAAGGAACTTTCGTGCGCAACTGTTGGCCAACGCACAAGAGAAGAACAAGAAGTCAAACACTGAAGTGGAGAATGGTGCGGTCGTAGCAAAGGCGAAGGCAGCTCAGAAGCCTAAAGAACCTGAAGTAATAGTGATTAGCTCTGATGATGAATCGGAGGAAAAGACAAAGAAGCAAACTGTTGTCAAGGGAAACAAGGCAAGGGACAAAAATGCCAAGGCCTTTAGTTCAGTCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACTCCCAAGGGAATTGGTGGTGAACATTGATGCAACTGACACGGACAATGAATTGGCAGCAGCGGAGTATATTGATGATATCTACGAGTTTTATAAAAATACTGAAGAAGATGGCCGTGTGCATGATTACATGGGTTCACAGCCAGATATTAATGCCAAGATGAGATCAATCCTCGTGGACTGGTTGATAGAAGTGCATAGAAAATTTGAGCTCATGCCAGAGACTCTCTACTTGACCCTGAACATTGTTGATCGGTTCCTGTCGGTGAAGGCTGTGCCTAGAAGGGAACTTCAGCTTGTTGGCATCAGTTCTATGCTGCTGGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTGTGCATATCAGACAATGCTTATATCAATGAACAAGTGTTGTTGATGGAGAAAACAATCCTTAGAAAGCTTGAATGGTACTTAACGGTTCCCACACCCTATGTCTTCTTGGTTCGGTATATCAAAGCTTCCACTCCGTCTGATAAAGAGATGGAACATATGGTGTTTTTCCTTGCTGAACTTGGTATGATGCACTATCCTATTGTAGTCTTGCACTGCCCTTCTTTGATTGCTGCTTCTGCGGTGCTTGTGGCTCGATGTACACTTCAAAGGACTCCTCTCTGGACCAGCACTTTGAAGCACTATACAGGCTACTCCGAGGAGCAACTAAGGGATTGCGCCAAAATCCTGGTCAATCTTCATGCCACTGCTCCAGAAAGTAAGCTTAGGGCAGTTTACAAGAAATTCAGTAGCTCAGATTGCTGCTCTGTTGCCCTTCTTTCTCCAGCAAAGAACTTGACGGCACTGCCTTAA 1260 0.4532 MASIAEQPINGEIRENKQKNVGGEGRNRRVLQDIGNLVAKQGHGGINVSKPVTRNFRAQLLANAQEKNKKSNTEVENGAVVAKAKAAQKPKEPEVIVISSDDESEEKTKKQTVVKGNKARDKNAKAFSSVLSARSKAACGLPRELVVNIDATDTDNELAAAEYIDDIYEFYKNTEEDGRVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSVKAVPRRELQLVGISSMLLASKYEEIWAPEVNDFVCISDNAYINEQVLLMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDKEMEHMVFFLAELGMMHYPIVVLHCPSLIAASAVLVARCTLQRTPLWTSTLKHYTGYSEEQLRDCAKILVNLHATAPESKLRAVYKKFSSSDCCSVALLSPAKNLTALP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01423 419 SUPERFAMILY Cyclin-like 155 290 IPR036915 -
Lapu8g01423 419 CDD CYCLIN_AtCycB-like_rpt2 293 411 - -
Lapu8g01423 419 Pfam Cyclin, N-terminal domain 166 290 IPR006671 -
Lapu8g01423 419 MobiDBLite consensus disorder prediction 1 27 - -
Lapu8g01423 419 ProSitePatterns Cyclins signature. 195 226 IPR006671 -
Lapu8g01423 419 SMART cyclin_7 200 284 IPR013763 -
Lapu8g01423 419 SMART cyclin_7 297 381 IPR013763 -
Lapu8g01423 419 PANTHER CYCLINS 110 400 IPR039361 -
Lapu8g01423 419 PIRSF Cyclin_A_B_D_E 3 418 IPR046965 GO:0016538|GO:0044772
Lapu8g01423 419 CDD CYCLIN_AtCycB-like_rpt1 144 288 - -
Lapu8g01423 419 Gene3D - 166 408 - -
Lapu8g01423 419 Gene3D - 180 291 - -
Lapu8g01423 419 SMART Cyclin_C_2 293 412 IPR004367 -
Lapu8g01423 419 SUPERFAMILY Cyclin-like 294 414 IPR036915 -
Lapu8g01423 419 Pfam Cyclin, C-terminal domain 293 411 IPR004367 -
Lapu8g01423 419 FunFam G2/mitotic-specific cyclin-1 281 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01423 Lapu-Chr8 31537842 31541112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01423 6 409 Core Cell Cycle Gene Families AT2G26760 55.147 4.62e-151 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01423 K21777 - gmx:547782 649.432