Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01404 ATGGAAAAGAATGTTGCTGAATCCTTGGTTTTTCCACCATCACCACAGCCATCACCTATCCTTGCTGAGACAAATGTTCCTGGTTCCAAGAAACCAGATGATGAACAAATGGTTGAAACTGGTAATAGTTCTGAGAATGAGCTTGATCCAACCATGGAGTTCCCTGATGACATGCAAGAAAGGGAGGAATTTCCAAAGCCTGTAATCTTCGTTGTTGCTGCTGGCAAGGACATTGTGAACACTATCCTGGACTTTGCTCGTGACCGAGATCTCAGCATCTTGGTGCATCATGCTTCAGGTCCTATATCTGAAGTTAACATAAGTAACCCTTTGTACCCTTCCAAAGATTACACCTTTCAAGGAAACATGCACATGTTTTATCTGTCAGGTGTTTACACCAAATGTCTCTCACCTTCACCTCCCAAGAACGTTCCTTTCTCCTTCTTCAACGTTCAATTCTCCAGGGGAGAGGTTCCTCATATCTATGGTGGCCTTGTTGGACACAAACTCATTGCTGCAGAACCTGTGCAAGTCACAGCTTCTCTCTTTAAGGAGCATGAGTACTATGAGTACCATGAGCTCATGTCTCATCATGCCAATGATGAAAATGTTCAACCTGACACCACCACCACCACCACCAACAACAACAACAACGACAACACAGGCCATCACCATGGTTTCTTCAGTAGAGGAGCTTCAACCTCATCATCTCCAATGAGAGCCCTGCCCTTTGCTACTGCTCCTCCTCCTTTAGATTTTAGCAAGCTTTACCCAAATAACCAATCCAATCCTGGCAAGGAGTGA 804 0.4465 MEKNVAESLVFPPSPQPSPILAETNVPGSKKPDDEQMVETGNSSENELDPTMEFPDDMQEREEFPKPVIFVVAAGKDIVNTILDFARDRDLSILVHHASGPISEVNISNPLYPSKDYTFQGNMHMFYLSGVYTKCLSPSPPKNVPFSFFNVQFSRGEVPHIYGGLVGHKLIAAEPVQVTASLFKEHEYYEYHELMSHHANDENVQPDTTTTTTNNNNNDNTGHHHGFFSRGASTSSSPMRALPFATAPPPLDFSKLYPNNQSNPGKE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01404 267 MobiDBLite consensus disorder prediction 1 53 - -
Lapu8g01404 267 CDD DUF296 66 183 IPR005175 -
Lapu8g01404 267 Gene3D - 66 202 - -
Lapu8g01404 267 MobiDBLite consensus disorder prediction 201 241 - -
Lapu8g01404 267 MobiDBLite consensus disorder prediction 201 267 - -
Lapu8g01404 267 ProSiteProfiles PPC domain profile profile. 62 205 IPR005175 -
Lapu8g01404 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 66 231 IPR014476 GO:0003680
Lapu8g01404 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 66 184 IPR005175 -
Lapu8g01404 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 66 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01404 67 183 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 29.915 2.06e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01404 - - pvu:PHAVU_008G200900g 281.182