Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01399 ATGGAAGAATCAAGTGAACAGCAATCAGAAGAAAATAAAGTCTCCAATGAGAAAAATAAGAAAAGAAAGCTGAAAACACCAGCCCAACTTACGGCCTTGGAGAAATTTTATAATGAGCACAAGTACCCCACAGAGGAAATGAAATTAGAACTTGCTGAGGAATTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAGGATAAAAGATTGATGAAAGATGAAGCTGTGGTTAATGGACGACAAGATCGTTCAAGTGTTGTCATCCAGGATCACGGCAGTGGACTTGGGCAAGATTCTTGTGGAAGCAGTAAACATGTTGATTACAGGTATCAGGATGCTAAGGAGGTTGAGAGCCACGACTTCTACAATCACGAATTATATGTTACCGATATGACCCACAGACGCAGGAACCGTTATCCTGAAAATGTTAGTGGAGTGGATGACACATCATCTGAGAGCAGCTCTTTTTTGCAAGGAAGGGTGTTTGCTCAAGGTCAGGATCCATATGATATGGAGCCTTCTAGACATCTTACACCCAACGGAGCTCTTCCACCCCTAAATCCCAAAGGTGCAGTTAACATGGGATACAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGCATTACGAGGAAGATGGTCCACTACTTGGTATAGAATTTGATTCGCTTCCTCCAGGGGCCTTTGAATGCCAAACTGAAGATCCAGCTAATGAGATATATACTAAATTTAATTCCCAAGATTTGCATATGGATGGAGCTGACTTTGGCTCCTTGCATGAATCTGATTTCCAGGATAAAATAGATAAGAAAACCCGCCAGAATATAAAACAAAGGCAATCTTTCCACGGTTATACCACTCATGTTTCTGGAAGGAACCCTTTCCCAGATTTGTATGAAGACTCTACTGGAGAAGCATCTGGTTATAACAGTGCTAAGAATCATAGAATGAGCACCAAGCATGGTGTTGAGGGGATGCGATCGGATTCTGTTTCTAACCATAGTGATCACTTTGAAGAGAAGCTTGCAGTTAAGCAAAAAGATTTGATGCTGCATGGTTATGCTAAGATCAATCCAAAGAGAATACAAAGGAGTGGACATGTAAAATCTAAACCTTCTAGTTCAATCCGTAAATCACATGTTCCCATGGATACTGAAGAAAGGGGATTATCTGCTAGGAGGGCAAAGGAAGAGATGTTTAAGGTGGACCAGAAAGCAAAAAATACATACCGTGATGTAGATGGAGCAGGGAGGCTTTCAAATGAAATCATGGTTGCAAAGCGAGCTAAAGTTGGCATGCTTCAACATTTCAATGTGAAACCATTACCTGTTGCTGAGATGGAACAAAGGAAAATTCAGAGATCTGCTGCAGAGATGCCTTCTAGCTATAGTGAGGATGAAACTGCTGAAACCAGTTCCTCACTAGATTATTAA 1494 0.4083 MEESSEQQSEENKVSNEKNKKRKLKTPAQLTALEKFYNEHKYPTEEMKLELAEELGLTEKQISGWFCHRRLKDKRLMKDEAVVNGRQDRSSVVIQDHGSGLGQDSCGSSKHVDYRYQDAKEVESHDFYNHELYVTDMTHRRRNRYPENVSGVDDTSSESSSFLQGRVFAQGQDPYDMEPSRHLTPNGALPPLNPKGAVNMGYKPSGYLKVKGEIEHAAITAVKKQLGRHYEEDGPLLGIEFDSLPPGAFECQTEDPANEIYTKFNSQDLHMDGADFGSLHESDFQDKIDKKTRQNIKQRQSFHGYTTHVSGRNPFPDLYEDSTGEASGYNSAKNHRMSTKHGVEGMRSDSVSNHSDHFEEKLAVKQKDLMLHGYAKINPKRIQRSGHVKSKPSSSIRKSHVPMDTEERGLSARRAKEEMFKVDQKAKNTYRDVDGAGRLSNEIMVAKRAKVGMLQHFNVKPLPVAEMEQRKIQRSAAEMPSSYSEDETAETSSSLDY* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01399 497 MobiDBLite consensus disorder prediction 7 27 - -
Lapu8g01399 497 Gene3D - 12 82 - -
Lapu8g01399 497 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Lapu8g01399 497 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Lapu8g01399 497 SUPERFAMILY Homeodomain-like 18 83 IPR009057 -
Lapu8g01399 497 MobiDBLite consensus disorder prediction 1 27 - -
Lapu8g01399 497 MobiDBLite consensus disorder prediction 470 497 - -
Lapu8g01399 497 MobiDBLite consensus disorder prediction 383 411 - -
Lapu8g01399 497 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 261 - -
Lapu8g01399 497 CDD homeodomain 20 75 IPR001356 GO:0003677
Lapu8g01399 497 SMART HOX_1 18 80 IPR001356 GO:0003677
Lapu8g01399 497 MobiDBLite consensus disorder prediction 475 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01399 Lapu-Chr8 31267650 31272970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01399 3 271 Homeobox Transcription Factor Family AT4G03250 52.593 1.78e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lapu8g01399 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01399 - - gmx:100803515 806.979