Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01392 ATGGGAACTCCAAGTCTTGGCCTTGTACTTGTACTACTCCTTTTGTGTTTGGCCTGCCCTACTTCTGTTTCCTCTCTTCCCATGTCTTTGAGAAGGCAAGCCTTTATCTTGGTTTCCCTCAAACAAGATTTTGAGGCCAACACTGATTCTCTCAGCAGCTGGGACATGACTAACACTGTGTCCGTTTGCAATTGGGAGGGCATTGAGTGTGACCAAAAGAATAGGTCAGTGGTGTCACTGGACATATCCAACCTCAACCTTTCTGGCACACTTTCACCTTCTATCACAGGACTCAAGAGCCTTGAGAGTGTTTCACTTGCTGGGAATGGCTTCTCAGGAGGGTTCCCTAGTGATATTCACAAGCTGGCAGGGCTGAGATTCCTCAACATATCCGCCAACAAGTTTAGTGGAGACATGAATTGGGAGTTCTCTATGTTGAAAAGGCTTGAGGTGTTGGATGCTTACGACAACCAGTTCAACTGCTCCCTCCCTCTTGGTGTCACTCAGCTCCCCAAGCTCAATAGCTTGAATTTTGGCGGGAATTTTTTCTACGGTGAGATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCTGGAAATGATTTGAGGGGTCTCATACCATTCGAGCTTGGGAATCTCACTAACTTGACGCAACTTTTCTTGGGATACTACAATCAGTTTAATGGTGGAATCCCTCCTCAGTTCGGTAAGTTGGTTAATTTGGTTCATCTTGACCTTGCAAGTTGTGGTTTGACAGGTCCAATTCCAGCTGAGTTGGGAAATCTCAACAAAATAGACACTCTCTACTTGCAAACTAACCAGCTCAATGGCTCAATCCCTCCCCAACTAGGAAACATGAGTAGCTTGAAGTATCTTGATTTGTCAAACAATGAGCTAACAGGAGACATCCCCAATGAGTTCTCAGGCCTTCACGAACTCACCCTCTTGAACTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCGGAGCTACCTAATTTGGAAGTGCTGAAGCTTTGGCAGAACAATTTCACAGGTGCAATTCCCTCAAGACTTGGCCAAAATGGTAAATTGGCTGAGCTTGACCTATCAACTAACAAGCTCACTGGATTGGTGCCTAAATCTCTATGCCTTGGAAGGAGACTGAGGATTTTGATCCTGCTCAACAATTTTCTCTTTGGATCTTTGCCGGCTGATCTTGGTCAATGCTACTCACTTCAAAGAGTTCGTTTGGGACAAAACTATTTGACAGGATCAATACCAAATGGTTTTCTGCACTTGCCTGAGTTAGATCTTTTAGAATTGCAGAACAATTACCTCAGTGGTTGGATTCCACAAGAGACAAACACTGCACCTTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTAACCGGGTCCGTACCAACCTCTATTGGAAACTTTCCCAACTTGCAAATTCTGCTACTTCACGGAAATAGACTCTTGGGAGAAATTCCTCCAGATATAGGGAGGTTAAAAAATATACTCAAGTTGGATATGAGTGTCAACAACTTCTCAGGCATCATTCCTCCAGAGATAGGTAACTGTTTGTTGCTGACCTATTTAGATTTGAGCCAAAACCAGCTATCAGGCCCTATCCCAATTCAACTTTCTCAAATCCACATAATGAACTATCTGAATGTCTCATGGAACCACTTAAACCAAAATCTTCCCAAGGAACTTGGGGCCATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATCACTTCTCTGGTTCAATACCCGAGGAGGGGCAATTCTCAGTATTTAACTCTACATCGTTTATTGGGAATCCTCAACTTTGTGGATATGAGTTGAATCCATGTAAACATTCTTCAAATTTTGTATCAGAGTCCCAAGACAGTGGCGGTGCGAAGCCTGGTGTTCCTGGGAAGTATAAGCTTCTTTTTGCAGTGGCACTGTTAGCTTGTTCATTGGCATTTGCAACCTTGGCCTTTATCAAGAGCAGAAAGCAAAGGAGACACTCCAATTCATGGAAGCTCACAACATTTCAGAAACTGGAATATGGGAGTGAAGATATCATAAGGTGCTTAAAGGAAAGCAATGTCATAGGAAGGGGAGGAGCTGGGGTTGTATACCATGGAACCATGCCAAATGGAGAGCAAGTAGCTGTGAAGAAGCTATTGGGAATCAACAGAGGATGTTCTCATGATAATGGTCTCTCTGCAGAAATAAGGACTCTGGGGAGAATCAGGCACAGGTACATTGTGAGGTTACTGGCGTTTTGCTCAAATAGAGAGACCAATTTGCTTGTTTATGAATACATGCCAAATGGAAGCTTGGGAGAGGTCTTGCATGGGAAAAGGGGAGAGTTTCTCAAGTGGGATACCAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGGCTTTGCTATTTGCACCATGATTGTTCCCCTCTGATAATCCACAGAGATGTGAAGTCAAACAACATATTATTGAACTCTGAATTTGAGGTTCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATACTGGGACATCAGAGTGCATGTCATCCATTGCTGGTTCTTACGGTTACATAGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTGTTGCTAGAACTACTAACTGGGAGAAGGCCGGTAGGGAATTTTGGGGAAGAAGGACTAGACATTGTACAATGGACCAAGTTGCAAACAAATTGGAGCAAAGAGAAAGTGGTGAAGATTCTTGATGAGAGGCTATGTCACATTCCTTTAGATGAAGCAAAGCAGGTATACTTTGTGGCCATGCTATGTGTCCAAGAACAAAGTGTGGAGAGACCAACCATGAGGGAAGTGGTAGAAATGCTTGCACAAGCAAAGCAACCAAACACATTCCAAAAATGTCCATTTTCCTAA 2967 0.4334 MGTPSLGLVLVLLLLCLACPTSVSSLPMSLRRQAFILVSLKQDFEANTDSLSSWDMTNTVSVCNWEGIECDQKNRSVVSLDISNLNLSGTLSPSITGLKSLESVSLAGNGFSGGFPSDIHKLAGLRFLNISANKFSGDMNWEFSMLKRLEVLDAYDNQFNCSLPLGVTQLPKLNSLNFGGNFFYGEIPPSYGDMVQLNFLSLAGNDLRGLIPFELGNLTNLTQLFLGYYNQFNGGIPPQFGKLVNLVHLDLASCGLTGPIPAELGNLNKIDTLYLQTNQLNGSIPPQLGNMSSLKYLDLSNNELTGDIPNEFSGLHELTLLNLFINRLHGEIPPFIAELPNLEVLKLWQNNFTGAIPSRLGQNGKLAELDLSTNKLTGLVPKSLCLGRRLRILILLNNFLFGSLPADLGQCYSLQRVRLGQNYLTGSIPNGFLHLPELDLLELQNNYLSGWIPQETNTAPSKLGQLNLSNNRLTGSVPTSIGNFPNLQILLLHGNRLLGEIPPDIGRLKNILKLDMSVNNFSGIIPPEIGNCLLLTYLDLSQNQLSGPIPIQLSQIHIMNYLNVSWNHLNQNLPKELGAMKGLTSADFSHNHFSGSIPEEGQFSVFNSTSFIGNPQLCGYELNPCKHSSNFVSESQDSGGAKPGVPGKYKLLFAVALLACSLAFATLAFIKSRKQRRHSNSWKLTTFQKLEYGSEDIIRCLKESNVIGRGGAGVVYHGTMPNGEQVAVKKLLGINRGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEVHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGNFGEEGLDIVQWTKLQTNWSKEKVVKILDERLCHIPLDEAKQVYFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQKCPFS* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01392 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 343 629 - -
Lapu8g01392 988 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Lapu8g01392 988 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lapu8g01392 988 Pfam Leucine rich repeat 272 328 IPR001611 GO:0005515
Lapu8g01392 988 Gene3D Transferase(Phosphotransferase) domain 1 779 985 - -
Lapu8g01392 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 779 986 - -
Lapu8g01392 988 Gene3D Phosphorylase Kinase; domain 1 667 778 - -
Lapu8g01392 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 32 142 - -
Lapu8g01392 988 SUPERFAMILY Protein kinase-like (PK-like) 695 973 IPR011009 -
Lapu8g01392 988 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lapu8g01392 988 SUPERFAMILY L domain-like 308 628 - -
Lapu8g01392 988 Pfam Protein tyrosine and serine/threonine kinase 702 973 IPR001245 GO:0004672|GO:0006468
Lapu8g01392 988 SUPERFAMILY L domain-like 59 381 - -
Lapu8g01392 988 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 196 975 - -
Lapu8g01392 988 Gene3D Ribonuclease Inhibitor 287 365 IPR032675 -
Lapu8g01392 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 670 778 - -
Lapu8g01392 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 231 336 - -
Lapu8g01392 988 Gene3D Ribonuclease Inhibitor 188 286 IPR032675 -
Lapu8g01392 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Lapu8g01392 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 143 230 - -
Lapu8g01392 988 SMART serkin_6 701 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01392 988 SMART LRR_typ_2 339 363 IPR003591 -
Lapu8g01392 988 SMART LRR_typ_2 243 267 IPR003591 -
Lapu8g01392 988 SMART LRR_typ_2 291 314 IPR003591 -
Lapu8g01392 988 SMART LRR_typ_2 435 459 IPR003591 -
Lapu8g01392 988 SMART LRR_typ_2 364 386 IPR003591 -
Lapu8g01392 988 SMART LRR_typ_2 484 508 IPR003591 -
Lapu8g01392 988 SMART LRR_typ_2 194 217 IPR003591 -
Lapu8g01392 988 Gene3D Ribonuclease Inhibitor 366 629 IPR032675 -
Lapu8g01392 988 ProSiteProfiles Protein kinase domain profile. 701 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01392 Lapu-Chr8 31193466 31198188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01392 21 975 Receptor kinase-like Gene Family AT5G65700 57.588 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu8g01392 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01392 - - gmx:100816158 1796.17