Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01373 ATGGTATTTGGTGTCATGGATAACTCAAACGATTCGTCATCATCCTTGAGTTTTGTATCATCTCACCTCTCACATGGTTCTAGTAACCACAACGTGTCTTCCTCTACCAGCAATGAGCATGTGGCAAATATTGAAATTTTGAGCCTGAGTAAGCTCAGTGGAAGCCTTGAGAAGCTACTGATTGATGCTGAGTATGATTATTGTGATGCTGAGATTCTCGTTGAAGACATATCTGTGGGTATTCATCGTTGTATATTGGCCTCGCGTAGCCCTTTTTTTCAAGAAATTTTTAAGAAGGGAACTGATGCATCGGGGAAGGAAGGAAAACCAAGGTATCTCATGTCGGAATTGGTGCCTTATGGAGCAGTTGGATATGAAGCTTTCCAAGTTTTCTTGTACTATTTGTATACTGGAAGGCTAAAAGCTTCACCTACAGAAGTGACAACATGTGTTGATGAAACATGTATCCATGATGCATGTCGCCCTGCTATCAATTATGCCTTGGAGCTGATGTATGCTTCTGCCACTTTTCAGATGACAGAGCTGGTTTTACTTTTTCAGCGGCATCTGCTAAACTTTGTTGAGAAGGCTCATGTGGAAGATGTCATTCCTATTCTTACGGCTGCTTTCAACTGTCAAATAGATCAGCTTCTCTCCCGGTGCATTCACAGAGTAGCAAGGTCTGACTTTGACAACATATCATTGGAAAAAGAGCTCCCTTATGAAGTTGTGACTGAAATCAAATCGTGCAGACTCTCATCTCAGCCAGAATCCTCAGATAATGCAATGGAAGTGGAGCCTTTAAGTGAAAAGAGTATCAGGAGAATCCATAAAGCATTGGACTCTGATGATGTTGAGCTACTGAAGCTTCTTCTAAATGAGTCTAGGGTCACCCTAGATGATGCATATGCCCTGCACTATGCCTGTGCCTATAGTGATTCTAAGGTTATTCAAGAAGTTCTTGGTCTAGGCATGACGGATATTCTTCGTAGAAATTCCCGAGGATACACGGTTCTTCATGTGGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTGCTGAATAAAGGGGCATGTGCAACAGATACCACTCCAGATGGGCAAACTGCTCTTGCAATTTGTCAGAGGTTGACAAGACGCAAGGACTATCATGAGAAAACAGTGCGGTGTAAGGAATCTAACAGGGACAGGCTCTGTGTTGATGTCCTGGAGAGGGGGATGAGAAGTTCTATGACTGTGAGTATGTCTGTTTCATCACAGTTAACAGCTGATGATTTGCACATGAGACTAGATTACCTTGAAGATAGAGTTACATTTGCTCGGTTGTTGTTTCCTGCTGAGGCTAGGGTAGCCATTGAGAATGCTGAGGCAGATTCATCATCACTGTACGCAAACTCATCAGCTTTGAAGGGCACAAATGGAAATCTAAAAGAAGTAGATTTAAATGAATCTCCCTCTGCTCAAACCAGAAAACTTCAGTTAAGATTGCATGCCCTTATGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCAATTGTTCTGAAGTGCTTGATAAGTTTCTGGAAGATGATATGCCAGATGTGTTCTTCCTAGAGAAGGGCAGTGAAGAAGAGCAGAAAATGAAGAAAGCAAGGTTCATGGAACTTAAAGATGATGTGCAGAAAGCATTTCACAAAGATATGGCTGAAAATAACCATACAGTTTTTTCATCTTCAGTGTCCTCCTCATCATCTTCAACTCGGAGGGAAGGTCTTAACCACAGAGTGAGGAAAAAATGA 1782 0.4214 MVFGVMDNSNDSSSSLSFVSSHLSHGSSNHNVSSSTSNEHVANIEILSLSKLSGSLEKLLIDAEYDYCDAEILVEDISVGIHRCILASRSPFFQEIFKKGTDASGKEGKPRYLMSELVPYGAVGYEAFQVFLYYLYTGRLKASPTEVTTCVDETCIHDACRPAINYALELMYASATFQMTELVLLFQRHLLNFVEKAHVEDVIPILTAAFNCQIDQLLSRCIHRVARSDFDNISLEKELPYEVVTEIKSCRLSSQPESSDNAMEVEPLSEKSIRRIHKALDSDDVELLKLLLNESRVTLDDAYALHYACAYSDSKVIQEVLGLGMTDILRRNSRGYTVLHVAARRKDPSILVALLNKGACATDTTPDGQTALAICQRLTRRKDYHEKTVRCKESNRDRLCVDVLERGMRSSMTVSMSVSSQLTADDLHMRLDYLEDRVTFARLLFPAEARVAIENAEADSSSLYANSSALKGTNGNLKEVDLNESPSAQTRKLQLRLHALMKTVENGRRFFPNCSEVLDKFLEDDMPDVFFLEKGSEEEQKMKKARFMELKDDVQKAFHKDMAENNHTVFSSSVSSSSSSTRREGLNHRVRKK* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01373 593 FunFam Regulatory protein NPR3 42 226 - -
Lapu8g01373 593 ProSiteProfiles BTB domain profile. 68 144 IPR000210 GO:0005515
Lapu8g01373 593 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 241 398 - -
Lapu8g01373 593 SUPERFAMILY POZ domain 65 192 IPR011333 -
Lapu8g01373 593 Pfam NPR1/NIM1 like defence protein C terminal 376 577 IPR021094 -
Lapu8g01373 593 MobiDBLite consensus disorder prediction 569 593 - -
Lapu8g01373 593 SMART BTB_4 68 194 IPR000210 GO:0005515
Lapu8g01373 593 Pfam Ankyrin repeat 335 360 IPR002110 GO:0005515
Lapu8g01373 593 Pfam Domain of unknown function (DUF3420) 229 277 IPR024228 -
Lapu8g01373 593 PANTHER REGULATORY PROTEIN NPR3 27 584 IPR044292 GO:0009862|GO:2000022|GO:2000031
Lapu8g01373 593 Pfam BTB/POZ domain 65 145 IPR000210 GO:0005515
Lapu8g01373 593 ProSiteProfiles Ankyrin repeat profile. 334 359 IPR002110 GO:0005515
Lapu8g01373 593 SUPERFAMILY Ankyrin repeat 275 376 IPR036770 -
Lapu8g01373 593 Gene3D - 268 408 IPR036770 -
Lapu8g01373 593 CDD BTB_POZ_NPR_plant 57 194 - -
Lapu8g01373 593 Gene3D Potassium Channel Kv1.1; Chain A 32 226 IPR011333 -
Lapu8g01373 593 ProSiteProfiles Ankyrin repeat region circular profile. 334 359 - -
Lapu8g01373 593 SMART ANK_2a 300 330 IPR002110 GO:0005515
Lapu8g01373 593 SMART ANK_2a 271 299 IPR002110 GO:0005515
Lapu8g01373 593 SMART ANK_2a 334 363 IPR002110 GO:0005515
Lapu8g01373 593 MobiDBLite consensus disorder prediction 569 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01373 Lapu-Chr8 31021473 31025550 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu8g01373 NPR1_like_C 1.3e-80 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01373 K14508 - gmx:100816582 963.755