Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01366 ATGGATGTGGCCAAGTTACATAACTCTGATGATGAGGACAAGAAAGAAGATGAAGTTGTGCTTCCCGGGTTTAGATTCCATCCAACAGATGAAGAGCTTGTGGGGTTTTATCTGAGGCGAAAGGTGGAGAAGAAGCCTCTGAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAAGGAGAAAGTACAGGAACAGTATAAGGCCAAATAGAGTAACAGGATCTGGATTTTGGAAAGCCACAGGGATTGATAAACCCATATACTGTGTTAAAGAACCCCATGAATGCATTGGCCTGAAGAAATCATTGGTGTATTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCACCCAATGGAAAATCTACCATTGATTCACAACCTAATCACGTTCAAGAAGCTGAAGTGTGGACGCTGTGTCGAATATTCAAACGAGTCCCATCTTACAAAAAGTACACACCAAATTTGAAAGACTCAGCTGCAGCACCAATCACGAAGCCAAACCACACAAACTCTTCAAGTTCCAAAACATGCAGCTTAGACTCTGACAACGGCAACCCATACTTGACTTTCACAAACTCTTCACCTTCATCACTGCTCCTTCAACAAAATGAAATGAGGAAACCAGTTTTCGGACATGTTGACCAACAACGTAACCACATACTTCTAGGTCATGTACCTCAGCCTCCGACATCCTTTCCATACTCAACTTTTTGGAACCACCAGAATCTGGAATTTGCTACTGAGAATTGGGATGATCTCACATCTCTGGTTCAGTTTGCTGTTGATCCATCCAGGGTTTCTGATCATTGTAAAGAGTTTAATAGATTTTGA 882 0.4195 MDVAKLHNSDDEDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPRRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKSTIDSQPNHVQEAEVWTLCRIFKRVPSYKKYTPNLKDSAAAPITKPNHTNSSSSKTCSLDSDNGNPYLTFTNSSPSSLLLQQNEMRKPVFGHVDQQRNHILLGHVPQPPTSFPYSTFWNHQNLEFATENWDDLTSLVQFAVDPSRVSDHCKEFNRF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01366 293 Pfam No apical meristem (NAM) protein 22 132 IPR003441 GO:0003677|GO:0006355
Lapu8g01366 293 Gene3D NAC domain 29 164 IPR036093 GO:0003677|GO:0006355
Lapu8g01366 293 MobiDBLite consensus disorder prediction 180 195 - -
Lapu8g01366 293 MobiDBLite consensus disorder prediction 175 195 - -
Lapu8g01366 293 SUPERFAMILY NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Lapu8g01366 293 ProSiteProfiles NAC domain profile. 20 161 IPR003441 GO:0003677|GO:0006355
Lapu8g01366 293 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01366 Lapu-Chr8 30972710 30975358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01366 10 162 NAC Transcription Factor Family AT5G39820 54.787 1.88e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g01366 NAM 1.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01366 - - gmx:100784323 473.011