Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01352 ATGGCGAATGAGAAGGATCGTTTTTATGACCCCTTTCATTTCAACCACCATGAACAACAACTCAACCACTCTTCAAGCTTTCCATTCTTTAGGGACAACAACTCAGCACCAATTACATCACAAACCTTTCAAGGCTTTGATCATCATCATCATCATCATCATAATCCTTCTCATCACTACACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCCAGAGCCTTCGACATGTCTTGCTCATCATCTGAAGTGATCTCATCCATTGATGAAAACCTCAAGAAGCCTGGTGCAGGAGACTCAGCAGGGATCAGTGGAAACCAGTCAACACCCAATTCATCTGTGTCCTCCTCGTCCAATGAAGCTGAAGCACTTATAGAAGAAGACTCAACCAAAAGCCAGAAGAAAGATAAGCAGACAAAAGGGTGCGAAGATGGAGAAGAAAAGCCTAAGAAAGAGAACAAGCCTAAAAAGAAAGAGAAAAAGCCAAGAGAGCCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGATAACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCCTACCCAAGGAGCTATTATAGGTGCACCAGTCAGAAATGCAGTGTAAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCAATTGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTAAGGGGCAGTGCCGCCAGCATGCTGTCAGCACCTCCCTTTTTTGGTTCCTCTTATATGGTGCCAAGCTTACCCCCAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAATGATCACCAAAATCCAATGTTCCACGAAAACCTTTCCCATAATCTCCGTCTCCAGCCGCAACAACACCAACATCAGCACCAGTTCCGACTCCCTCGTGACTATGGTTTGCTACAAGACCTGCTACCATCATCATTCCCAGCCAAACAAGAGCCATGA 1008 0.4415 MANEKDRFYDPFHFNHHEQQLNHSSSFPFFRDNNSAPITSQTFQGFDHHHHHHHNPSHHYTTFTDCLHGSMDYNTLSRAFDMSCSSSEVISSIDENLKKPGAGDSAGISGNQSTPNSSVSSSSNEAEALIEEDSTKSQKKDKQTKGCEDGEEKPKKENKPKKKEKKPREPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAASMLSAPPFFGSSYMVPSLPPDFLAQLLPSYSQNDHQNPMFHENLSHNLRLQPQQHQHQHQFRLPRDYGLLQDLLPSSFPAKQEP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01352 335 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01352 335 MobiDBLite consensus disorder prediction 96 173 - -
Lapu8g01352 335 Gene3D WRKY domain 168 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01352 335 FunFam WRKY transcription factor 57 169 243 - -
Lapu8g01352 335 MobiDBLite consensus disorder prediction 129 173 - -
Lapu8g01352 335 MobiDBLite consensus disorder prediction 106 128 - -
Lapu8g01352 335 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01352 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 302 IPR044810 GO:0003700
Lapu8g01352 335 SUPERFAMILY WRKY DNA-binding domain 176 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01352 335 Pfam WRKY DNA -binding domain 184 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01352 Lapu-Chr8 30842503 30845214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01352 55 335 WRKY Transcription Factor Family AT4G18170 46.441 3.17e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g01352 WRKY 8.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01352 - - gmx:100806016 477.633