Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01349 ATGGACAGAAAGCAAGAACAAGACAAGGGGAACTCAAATATGTCTGGCATTGATGTTAGTCTAATAACTCCCAAAGTCCCAAAAGCAGTTTCACCTGTTTCTTCTTCTGCAGCAGAGGGGGACACCTTAAGGCGGCCACGTGGACGGCCAGCCGGCTCGAAAAACAAGCCTAAGCCACCCATAATTGTCACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGTTCAGGCTGTGATGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGACTCTACATACTCAATGGGACAGGCTGTGTAACAAATGTAACACTGCGCCAGCCAGGCTCATCTGGTGCCATTGTGACCCTTCATGGTAGGTTTGAGATTCTGTCACTGTTGGGGTCAATCCTTCCGCCACCAGCCCCTCCAGGGATCACAGGCCTCACAATTTACTTGGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTGGTTGGTGCTTTGATTGCTTCAGGCCCTCTTGTAATCATGGCTGCGTCATTCATGCATGCTACTTTCGATCGTCTGCCTTTGGAAGATGATGAACTTGCTGCTGCCATGCAGAATCAGCATTACCAAAATGGACGCACCCACCATCTTGATATCTCTGACTTGTATGCAATGCCACAGAACCTGCTCATGAATGGTACAATGCCCCCAGAAATATACTCTTGGGCACCAGGACGGAACTTGTCAAAAACCTGA 750 0.488 MDRKQEQDKGNSNMSGIDVSLITPKVPKAVSPVSSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYILNGTGCVTNVTLRQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGTMPPEIYSWAPGRNLSKT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01349 249 Gene3D - 70 214 - -
Lapu8g01349 249 CDD DUF296 74 154 IPR005175 -
Lapu8g01349 249 ProSiteProfiles PPC domain profile profile. 68 206 IPR005175 -
Lapu8g01349 249 FunFam AT-hook motif nuclear-localized protein 71 212 - -
Lapu8g01349 249 MobiDBLite consensus disorder prediction 1 61 - -
Lapu8g01349 249 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 183 IPR005175 -
Lapu8g01349 249 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 211 IPR014476 GO:0003680
Lapu8g01349 249 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01349 Lapu-Chr8 30819940 30820689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01349 1 248 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 67.200 1.61e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01349 - - gmx:100804941 432.18