Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01345 ACTCTCACACATGAATCGGTGATTCCTTTGTTCTCCATCTCGCAAATTCAATTCTTCCTTCCACTTCACAATTTCGGTCGAAACCAAATGATTCCACAACAAGAACCCGATTTCAATCTCAACCACCTCAAGCTATATTATGGAAAGCTGTTTCCTTTTGCTGATTTAGTCAGATGGGTGTCTTATGGCAACGATGGGAAGCACCCTGGTTGTGATCAATCCTACTTGGGGCGAAGAGAGTTCTCCTTCACTCTGGAGAATGATATTTATCTGCGTTTCCAATCTTTCAACAATGCCCTTGAGCTCGAAAACTCAGTCAAAGAAAAGTCCCCAGTTAAGATAGATATTGGACCTGTCTACTCTGTTGATCCTGCAAAAAGGTATGCCTATGCACAGAGTGAAAATAATGTCTTTGCCCCAGTTGAGAGGGAGTTGATTTTTGATATAGATATGACAGACTATGATGATATTAGATACTGCTGTTCAGGTGCTGATGTTTGTTTGGTTTGCTGGCCGTTGATGACTATAGCAATCAAAGTGATTGATACTGCCTTAAGAGATGACTTTGGTTTCAAACACGTTCTCTGGGTATACAGTGGACGCAGAGGTGTTCATTGCTGGGTCTGTGATGGGAAGGCAAGAAGGTTGTCTAATGAGCAGAGAGGTGCCATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGACGGGTGCTTCTCTTCATCCTTTCTTGGCGACATCATACACTAACGTTCTCAAGGACTATTTCGAGAAAAATCTGCTTACCGGACAAGATTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTAAACATGATTCCTGATGAATCTGTTGCTTCTGAACTTAGGGGAAGATGGCAAGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATAAATGTTGTTCGATGGGAACAGTTCAAACAGTTGCTGCAATCTGGGAAACATAAGGCGCAAGGGCTCCGCCGATGTGTTGAAGAGATTGTGTTCTCCTTTACATATCCCAGGCTAGATATGGAGGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTCTGTGTACATCCTAAAACAGGTCGTGTTTGTGTCCCTATTGATCCAAATCGGTGCGACGAATTTGATCCTACGACAGTACCCACCCTTTCACAGCTGATAGAAGAGCTTAATTATGAAGGCTCAAGATCTGATGTTGATGGTGAATTGAATAGAACTTCCCTTGGAAATGCCATTACGCTCTTCAGATCGTCATTCTTACAGCCTTTACTAAAAGCCTGCAAGGATGAGATAGAAAATTCTTATAACTCAAAATTGCAGCAGTCAAAGAATTCCCTTGGTTGGTAG 1389 0.4168 TLTHESVIPLFSISQIQFFLPLHNFGRNQMIPQQEPDFNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYLGRREFSFTLENDIYLRFQSFNNALELENSVKEKSPVKIDIGPVYSVDPAKRYAYAQSENNVFAPVERELIFDIDMTDYDDIRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHVLWVYSGRRGVHCWVCDGKARRLSNEQRGAIADYFRVYKGNENSHKKVSLTGASLHPFLATSYTNVLKDYFEKNLLTGQDLLATEERYEKILNMIPDESVASELRGRWQDSRRSSSAKEDINVVRWEQFKQLLQSGKHKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLSQLIEELNYEGSRSDVDGELNRTSLGNAITLFRSSFLQPLLKACKDEIENSYNSKLQQSKNSLGW* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01345 462 CDD AE_Prim_S 52 391 IPR014052 GO:0003896|GO:0006269
Lapu8g01345 462 PANTHER DNA PRIMASE SMALL SUBUNIT 34 445 - -
Lapu8g01345 462 Gene3D DNA primase, PRIM domain 29 443 - -
Lapu8g01345 462 SUPERFAMILY Prim-pol domain 40 405 - -
Lapu8g01345 462 FunFam DNA primase 30 443 - -
Lapu8g01345 462 Pfam DNA primase small subunit 147 382 IPR002755 GO:0003896|GO:0006269
Lapu8g01345 462 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 44 402 IPR014052 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01345 26 462 Core DNA Replication Machinery Family AT5G41880 66.063 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01345 K02684 - gmx:100780574 849.736