Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01344 ATGCAGCAAGATCACAGAAAAAAGGGTTCAATGGAGATGGAATTTTTCTCTGATTATGGCGATGCCAACAGGTACAAAATTCAAGAGGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGCGAGAAAGTAGCAATAAAAAAGATACATGATATCTTCGAGCATGTATCTGATGCTGCACGTATTCTCCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGTTGCCTCCTTCGAGGAGGGACTTTAAAGATATTTATGTTGTATTTGAGCTAATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACTTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCTTTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATATTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTAGAGTTGCTTTTAGTGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCCTTTTACTCAAGGTATACACCAGCAATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAAGCCTCTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGTACTCCCTCGCTAGATACTATATCCCGGGTACGCAATGATAAGGCACGGAGATACCTGAATAGTATGAGGAAAAAGCAGCCTATACCATTTGCGCAAAAATTTCCTAATGCAGATCCTTTAGCACTACAACTACTAGAAAGGTTGCTCGCCTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAGTTGAAAGGGAACCGTCATGCCAGCCTATTACTAAAATGGAGTTTGAATTCGAAAGGAGGAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTTCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAGGAAACTGGTGGCAAAAGTTGTCCAGTTATGCCACCTGAAAGAAAGCATGTATCACTTCCCAGGTCAACCATTATACATTCAAATATAGTACCCACAAAAGAGCAATCAAATATTGCTTCCAGCAAAATCAGGCAGACAACTGAGGAATCCAACAATAATTCCAGGGATGCAGAAAATCCCGCGCCAAGGTCCATTCAGGGTCTGCAAAAATTTTCACTTGCAAAACCTGGAAAAGTTGTTGGGCCGGTTATTCCATACGAGTATGCCAGTGTTGTCAAGGGTTCATATGAGCCCAGGACATTTATGAGAGGTTCTGTTCTTCCTTCTCAACCTACTCCCCCAACGGATCATTATCAAAGATTAACCTCTGGGAAACAAGAAAGGTCAGCAACAGAAGCTGACAAGTGTGTATCTTTACAATCAAAACTTGCTCAGCAATGTTGTGTGAATGGCCAAATAGCACCAGAAATAGCTATAAATATTGATTCCAACCCTTTTTTCATGACGCGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGCCATTGACACAAAGTTGCTGCAATCAAAGGCTCATCAATATGCAGGGATTAGTACAACTGCTCATAGAAAGGTTGGACCGGTTCAGTATGGTATAACAAGGTTGTTCTAG 1836 0.4003 MQQDHRKKGSMEMEFFSDYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLNSMRKKQPIPFAQKFPNADPLALQLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKKQFAHLEETGGKSCPVMPPERKHVSLPRSTIIHSNIVPTKEQSNIASSKIRQTTEESNNNSRDAENPAPRSIQGLQKFSLAKPGKVVGPVIPYEYASVVKGSYEPRTFMRGSVLPSQPTPPTDHYQRLTSGKQERSATEADKCVSLQSKLAQQCCVNGQIAPEIAINIDSNPFFMTRAGVNKIEQDDRIAIDTKLLQSKAHQYAGISTTAHRKVGPVQYGITRLF* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01344 611 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lapu8g01344 611 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01344 611 MobiDBLite consensus disorder prediction 421 457 - -
Lapu8g01344 611 FunFam Mitogen-activated protein kinase 15 118 - -
Lapu8g01344 611 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Lapu8g01344 611 MobiDBLite consensus disorder prediction 421 453 - -
Lapu8g01344 611 MobiDBLite consensus disorder prediction 497 522 - -
Lapu8g01344 611 MobiDBLite consensus disorder prediction 498 513 - -
Lapu8g01344 611 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 372 - -
Lapu8g01344 611 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lapu8g01344 611 CDD STKc_TDY_MAPK 24 361 - -
Lapu8g01344 611 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01344 611 FunFam Mitogen-activated protein kinase 111 339 - -
Lapu8g01344 611 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Lapu8g01344 611 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01344 611 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01344 Lapu-Chr8 30783315 30789476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01344 1 445 MAP Kinase Gene Family AT2G42880 86.067 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lapu8g01344 Pkinase 7.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01344 - - aprc:113848523 1057.36