Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01335 ATGGAAACCAAGAAGCTCCAGCTGCGCTTTTCTCTCGGCCGGCAATCCTCCCTCGCGCCGGAGCGTGACGGCGCTGGCGACGTGTCGGAGGCGCTGGATCCGACGGTTCGGTTGATGTATCTGGCTAACGAGGGAGACTTGGACGGGATTGAGGAGCTGCTGGACGCGGGGAGCGACGTCAATTTCACCGACATTGACGGCCGCACCGCGCTCCACGTCGCCGCCTGCCAGGGCCGCACTGACGTCGTTGACCTGCTTCTACGACGAGGCGCTGATGTCGATCCACGTGACCGCTGGGGCAGCACACCTCTAGCTGATGCAATGTTCTACAAAAACCATGACGTCGTGAAGCTTTTGGAGGAACACGGTGCAAAACCTCCGATAACTCCCATGCATGTAGAGAATGCTCGAGAAGTCCCAGAGTACGAGATTGATCCTTCTGAACTTGATTTTACTAATAGTGTTTGCATAACAAAGGGAACTTTCCGGATTGCATTATGGCGTGGAACTCGCGTTGCTGTCAAGACTCTTGGGGAGGAAGTGTTCACGGATGATGAAAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTTCAGTTTTTGGGTGCTGTAACCCAAAGCACCCCAATGATGATCGTCACAGAATATCTACCCCAGGTGGATCTTGGTGCCTACATGAAGCGGAAAGGTGCATTAAAACCGGTAACAGCTGTAAAGTTTGCACTTGATATTGCTAGGGGTATGAACTATTTGCACGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATTTTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTCAAAGTTGCTAAAACAGTCAAAGAAGACAAACCCGTGACAAGCCTGGATACATCATGGCGATATGTTGCACCAGAAGTCTATAGAAATGAGGAATACGACACAAAAGTGGATGTGTTTTCTTTTGCACTGATATTACAGGAGATGATTGAAGGTTGTCCACCATTTTATGCAAAGCCAGAAAACGAAGTTCCTAAATTGTATGTCGAAAATGAGCGTCCACCATTTAGAGCATTGCCAAAGCTTTATGATTATGGACTAAAACAGTTAATTGAGGCATGCTGGGATGAAAAACCACAAAGAAGACCAACATTTAGGCAAATAATTGGGAGGTTGGAAGACATCAACCACCATCTTGTTCAAAAGAGGCACTGGAAGATTCGAGCTCCTGGATGTATCCAGCACCTAGAGGCCCTATTTAGGGGTAATCGCACAAGTCCAAGTAGCCGATCATCTCGCTCCACGGCCAGATAA 1362 0.4758 METKKLQLRFSLGRQSSLAPERDGAGDVSEALDPTVRLMYLANEGDLDGIEELLDAGSDVNFTDIDGRTALHVAACQGRTDVVDLLLRRGADVDPRDRWGSTPLADAMFYKNHDVVKLLEEHGAKPPITPMHVENAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTRVAVKTLGEEVFTDDEKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQVDLGAYMKRKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYAKPENEVPKLYVENERPPFRALPKLYDYGLKQLIEACWDEKPQRRPTFRQIIGRLEDINHHLVQKRHWKIRAPGCIQHLEALFRGNRTSPSSRSSRSTAR* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01335 453 SMART ANK_2a 99 128 IPR002110 GO:0005515
Lapu8g01335 453 SMART ANK_2a 32 62 IPR002110 GO:0005515
Lapu8g01335 453 SMART ANK_2a 66 95 IPR002110 GO:0005515
Lapu8g01335 453 Pfam Ankyrin repeats (3 copies) 38 126 IPR002110 GO:0005515
Lapu8g01335 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 413 - -
Lapu8g01335 453 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Lapu8g01335 453 FunFam serine/threonine-protein kinase STY46-like 144 227 - -
Lapu8g01335 453 Pfam Protein tyrosine and serine/threonine kinase 169 407 IPR001245 GO:0004672|GO:0006468
Lapu8g01335 453 PRINTS Ankyrin repeat signature 67 82 IPR002110 GO:0005515
Lapu8g01335 453 PRINTS Ankyrin repeat signature 115 129 IPR002110 GO:0005515
Lapu8g01335 453 Gene3D - 28 139 IPR036770 -
Lapu8g01335 453 Gene3D Transferase(Phosphotransferase) domain 1 228 426 - -
Lapu8g01335 453 CDD STKc_MAP3K-like 165 408 - -
Lapu8g01335 453 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Lapu8g01335 453 FunFam Integrin-linked protein kinase family 16 142 - -
Lapu8g01335 453 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Lapu8g01335 453 ProSiteProfiles Protein kinase domain profile. 151 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01335 453 Gene3D Phosphorylase Kinase; domain 1 144 226 - -
Lapu8g01335 453 PIRSF ILK 2 431 - -
Lapu8g01335 453 FunFam Os01g0748600 protein 137 428 - -
Lapu8g01335 453 SUPERFAMILY Protein kinase-like (PK-like) 166 427 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01335 Lapu-Chr8 30684007 30691172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01335 1 423 MAP Kinase Kinase Kinase AT4G18950 65.278 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lapu8g01335 PK_Tyr_Ser-Thr 6.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01335 - - gmx:100795964 815.839