Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01332 ATGGAGTCCAACTTGGGTCATTCCAGGATCTTCTTTTTACTCCTCCTTGGTTCAACTTCATTGATTTTCCTCTCACACTTGGCTTCTGCAGCCACTCCCAAGCTCGACACTCAAGAGGTGAAGGCACTGAAGGAGATAGGGAGCAAGATTGGGAAGAAGGATTGGGACTTTGGAGTGGATCCTTGCAGTGGAAAAGGTAGTTGGAATGTTTCAGATGCTAGGAAAGGCTTTGAGAGCTATGTGATGTGTAATTGTTCCTTCAATAACAATACTTCTTGCCATGTTAGTCTAGTAAAAAAATTCTTGAAGGCTCAGAATCTGTCTGGTACTCTCTCACCAATGTTTTCCAAGCTTCATTATCTCACAGAATTGGACCTCAGTCGTAACATCATCACTGGTTCTATACCTCCACAGTGGAGTACCATGCGCTTGGTTGAGTTCTCTTTAATGGGAAACAAATTATCAGGGCCATTCCCCAAAGTTCTCACCAATATCACAACCCTCAGAAACTTGAGTATTGAAGGAAACCTATTTTCAGGCCACATTCCAACGGAGATTGAGAATTTGATCAATTTAGAAAAACTCATTCTATCATCCAATGGATTCACAGGAGCACTGCCACCCGCACTTTCCAAGTTGACCAAGTTGATTGATTTGAGGATAAGCGACAATAATTTCTTTGGGAAGATACCTGATTTCATTAGTAACTGGACAGTAATAGAAAAGCTGCATATGCACGGTTGCTCTCTTGAGGGGCCAATACCTTCTAGCATTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAAAAGGTGATAAAACCTCAGCTTTCCCACCACTAAATAACATGAAATCCATGAAGACACTGGTATTGAGAAAATGCATGATTAAAGGAGAAATCCCAGAATATATTGGGAGAATGGAAAAACTGAAAATATTGGATTTGAGTTACAATGGCTTGAGTGGAGAGATACCTGACTCTTTTGCCCAACTTGACAAAGTAGACTTCATGTATCTTACAGGGAACAAGTTATCAGGGATTATACCTCGCTGGGTCCTAGGAAATAACAAAAATGTTGATGTCTCTGACAATAATTTCTCCTGGGATAGCTCAAGTCCAACTGAATGCCCACACGGGAGCATAAACCTTGTTGAAAGCTACTCTCCATCTGTAAATAAACAAAATAAGATTCATTCATGCTTAAAAAGGAACTTTCCATGCGATGCTTCAGTTAGCGATTATCAGTACGCCTTGAACATTAATTGTGGTGGTAAGGAAGCAAATATTAGTGGTCATATTTATGAAGCTGACAGTGAACTAAAAGGTGCTGCGATGTTATATTCCTCTAGCCAGAATTGGGCCCTGAGCAGCACTGGAAGCTTCATGGACAATGATATTGACTCTGATCCATACACTGTGGCCAATACTTCTAGACTTAATATCTCTGCACTCAACTCACAACTATACAGAACAGCTCGTGTTTCTCCCCTTGCGCTCACATACTATGGCCGCTGCCTAATAAATGGAAATTACACAATCAAGCTTCACTTTGCAGAGATTATTTTCATCAATGATAGGTCATTTAATAGTCTTGGAAGGCGGGTATTTGACGTGTATATCCAGGAAAATTTAGTGCTGAAAGACTTTGATATCCAAAAAGAAGCTGGTGGTACTGGCAAGGCCATTGTGAAGACATTCAATGCTACTGTCACCCAACATACTTTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATTCCCACAAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAACCCTAATTTTAAACCTCCATCAAGGGATGACAACAGAACTTATGTCATACTGGCAATTGGCATAGTCGCTGGTGTTTTAGTTCTTCTACTTCTGGGGCTGGTTTTCATGAGGTGGATGGGATGGTTAGGAGGCAAAGATCCAGTGTATAAAGAGCTTAGGGGTATAGATCTGCAGACGGGATTATTTACACTAAGACAAATGAAAGCAGCAACAAAAAACTTTGATGCAGCAAACAAAATTGGGGAAGGTGGCTTTGGCTGTGTTTACAAGGGCCTACTATCAGATGGTACAATAATAGCTGTAAAGCAGCTGTCTTCAAAATCTAAACAAGGAAACCGTGAGTTTGTGAATGAGATGGGATTGATATCTGGACTCCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTCGAGGGGAACCAGCTAATACTGATATATGAGTATATGGAAAATAATTGTCTATCTCGGATTCTTTTTGGGAGGAATCCAGAGAGCAGAATAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGGCAAGTAATGTATTGCTTGACAAGGATTTTAACGCTAAAGTTTCAGATTTTGGCTTGGCAAAACTTATCGAAGATGACAAAACCCATATTAGTACTCGAGTTGCAGGAACAATTGGTTACATGGCTCCAGAGTATGCAATGCGTGGCTACCTAACTGATAAAGCAGATGTTTATAGCTTTGGGGTGGTTGCACTGGAAACTGTCAGCGGAAAGAGCAATACAAATTTCAGGCCAAACGAGGATTTTGTTTATCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGGAGTCTTCTGGAGCTGGTTGACCCAGATTTGGGTTCAGAATATTCAACTGAGGAGGCCATGGTGGTGCTGAATGTGGCCCTCTTATGTACTAATGCATCTCCTACACTTAGACCAACAATGTCCCAAGCTGTGAGCATGCTTGAAGGTTGGACTGATATTCAGGATCTGCTTTCTGATCCGGGATATTCAGCTGTTAGTTCCAGTTCTAAATATAAGAGTATGAGAAATCATTTCTGGCAGAATCCAAGTAGAACACATAGCATGTCAATACCTAGTATATACACTGATTCCTCTGGCTCTCATGTTGAAACAGAAAAGAACTATCGTCCTGTAACAGTTAATTCAGATGGATCAGACAAGTCAAACTAG 3090 0.4061 MESNLGHSRIFFLLLLGSTSLIFLSHLASAATPKLDTQEVKALKEIGSKIGKKDWDFGVDPCSGKGSWNVSDARKGFESYVMCNCSFNNNTSCHVSLVKKFLKAQNLSGTLSPMFSKLHYLTELDLSRNIITGSIPPQWSTMRLVEFSLMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGHIPTEIENLINLEKLILSSNGFTGALPPALSKLTKLIDLRISDNNFFGKIPDFISNWTVIEKLHMHGCSLEGPIPSSISALTRLSDLRITDLKGDKTSAFPPLNNMKSMKTLVLRKCMIKGEIPEYIGRMEKLKILDLSYNGLSGEIPDSFAQLDKVDFMYLTGNKLSGIIPRWVLGNNKNVDVSDNNFSWDSSSPTECPHGSINLVESYSPSVNKQNKIHSCLKRNFPCDASVSDYQYALNINCGGKEANISGHIYEADSELKGAAMLYSSSQNWALSSTGSFMDNDIDSDPYTVANTSRLNISALNSQLYRTARVSPLALTYYGRCLINGNYTIKLHFAEIIFINDRSFNSLGRRVFDVYIQENLVLKDFDIQKEAGGTGKAIVKTFNATVTQHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPSRDDNRTYVILAIGIVAGVLVLLLLGLVFMRWMGWLGGKDPVYKELRGIDLQTGLFTLRQMKAATKNFDAANKIGEGGFGCVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGLISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRILFGRNPESRIKLDWPTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETVSGKSNTNFRPNEDFVYLLDWAYVLQERGSLLELVDPDLGSEYSTEEAMVVLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDLLSDPGYSAVSSSSKYKSMRNHFWQNPSRTHSMSIPSIYTDSSGSHVETEKNYRPVTVNSDGSDKSN* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01332 1029 ProSitePatterns Protein kinases ATP-binding region signature. 688 710 IPR017441 GO:0005524
Lapu8g01332 1029 SUPERFAMILY Protein kinase-like (PK-like) 666 986 IPR011009 -
Lapu8g01332 1029 Pfam Protein tyrosine and serine/threonine kinase 685 952 IPR001245 GO:0004672|GO:0006468
Lapu8g01332 1029 Gene3D Transferase(Phosphotransferase) domain 1 758 966 - -
Lapu8g01332 1029 Gene3D - 416 610 - -
Lapu8g01332 1029 Gene3D Phosphorylase Kinase; domain 1 656 757 - -
Lapu8g01332 1029 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 206 - -
Lapu8g01332 1029 Pfam Leucine rich repeat 289 347 IPR001611 GO:0005515
Lapu8g01332 1029 Gene3D Ribonuclease Inhibitor 237 403 IPR032675 -
Lapu8g01332 1029 MobiDBLite consensus disorder prediction 997 1029 - -
Lapu8g01332 1029 SUPERFAMILY L domain-like 84 369 - -
Lapu8g01332 1029 SMART serkin_6 682 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01332 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase 758 966 - -
Lapu8g01332 1029 Gene3D Ribonuclease Inhibitor 165 236 IPR032675 -
Lapu8g01332 1029 Gene3D Ribonuclease Inhibitor 51 164 IPR032675 -
Lapu8g01332 1029 Pfam Malectin domain 420 605 IPR021720 -
Lapu8g01332 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Lapu8g01332 1029 ProSiteProfiles Protein kinase domain profile. 682 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01332 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 988 - -
Lapu8g01332 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 237 385 - -
Lapu8g01332 1029 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 652 757 - -
Lapu8g01332 1029 CDD STKc_IRAK 688 956 - -
Lapu8g01332 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 418 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01332 Lapu-Chr8 30664360 30675116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01332 134 226 Receptor kinase-like Gene Family AT1G07650 32.258 6.23e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu8g01332 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01332 - - vun:114195543 1843.55