Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01320 ATGAGTTTCTTTTCTTGTTGCACGTCATCAGAGAAGATCAACAAGAAATCATTCAGAAGGAGCAGTGAGGACTTCCATTATGCAAAATCTATGCCAATATGTGCTAGCATGTGTTTTAAACCTGATAACAGCAAGAGGAAGTTCATAGAACAAGAAATAGCAAAGATTGGAAAAGGGAATATTACCTCTCAGACTTTTTCTTATCACGAGCTATGTGTTGCAACTCGGAACTTTCACCCTGAGAATATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCATTAAAAGCATAAACCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTGTTGCACCACCCTAACCTTGTAAATTTGGTAGGGTATTGTGCAGATGGTGAACAAAGGATTTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTGCGGACAGAAAGCCTTTGGATTGGCATACTAGAATGAACATTGCAGCAGGTGCAGCTAAAGGTCTTGAATACTTGCATGAAGTAGCAAATCCACCAGTTATATACCGTGATTTCAAATCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCGACAGGTCAATTGACTACAAAATCAGATATATACAGCTTTGGAGTGGTGTTTCTAGAGATGATCACTGGAAGAAGAGTAATTGATCAGTCAAGACCCTCTCTAGAGCAAAACTTAGTTACTTGGGCACAACCACTATTCAAAGACAGAAGGAAATTTACATTAATGGCTGATCCATTGCTAAAAGGGAACTACCCAGCAAAGGGTCTACATCAAGCACTAGCAGTTGCAGCAATGTGTCTACAGGAGGAAGCAAGTACCCGACCTTTGATTAGTGACGTGGTTACAGCTCTTGATGTTTTAGCAAAGAATCAGATGCCAGTGGGAAAACAGCAACGTACGAAAGAGAGTTTTTTGGAAGACAGAGAATTCAGTTGA 1140 0.4026 MSFFSCCTSSEKINKKSFRRSSEDFHYAKSMPICASMCFKPDNSKRKFIEQEIAKIGKGNITSQTFSYHELCVATRNFHPENMIGEGGFGRVYKGRIKSINQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPADRKPLDWHTRMNIAAGAAKGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRVIDQSRPSLEQNLVTWAQPLFKDRRKFTLMADPLLKGNYPAKGLHQALAVAAMCLQEEASTRPLISDVVTALDVLAKNQMPVGKQQRTKESFLEDREFS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01320 379 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01320 379 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Lapu8g01320 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Lapu8g01320 379 CDD STKc_IRAK 84 353 - -
Lapu8g01320 379 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Lapu8g01320 379 PANTHER OS07G0668900 PROTEIN 22 361 - -
Lapu8g01320 379 Pfam Protein kinase domain 79 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01320 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lapu8g01320 379 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Lapu8g01320 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Lapu8g01320 379 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01320 Lapu-Chr8 30570537 30573068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01320 60 356 Glycoside Hydrolase AT3G07070 71.717 1.65e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu8g01320 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01320 - - gmx:100797557 682.945