Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01309 ATGGAAGGTGTTATTGTGAGAAGAGTTATTCCTTCGGATAACAGTTGTCTCTTCAATGCAGTTGGATATGTAATGGATCATGACAAGAAGAAAGCTCCTGAGTTGCGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCACAGAAATATTGTGAAGCATTTCTTGGGAAGCCAAATGCAGAATATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGACTATTATGGACGTGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATCTGTATGGTCAGGAAAGTAACTACTCTGAAAGAGTAATGCTGATTTATGATGGTCTCCACTATGATGCATTAGTGATGTCTCCCGTCGAGGAAGCTCCTGAAGAGTTTGATCAGACCATATTTAGTGTTCAGATGAACAGAAGCATTGGACCTGTCGAGGGGCTTGCTTTAAATTTTGTGAAGGACCAGCAGAGGAAACGGAGTTACACTGACACTTCCAAGTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGCCAGAAGGAGGCCATGGAGCATGCACAGGCTACCGGTCATGTTAACTTTCAGGAGTATAGATGA 627 0.429 MEGVIVRRVIPSDNSCLFNAVGYVMDHDKKKAPELRQVIAATVASDPQKYCEAFLGKPNAEYCNWILDSEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQESNYSERVMLIYDGLHYDALVMSPVEEAPEEFDQTIFSVQMNRSIGPVEGLALNFVKDQQRKRSYTDTSKFTLRCGVCQIGVVGQKEAMEHAQATGHVNFQEYR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01309 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Lapu8g01309 208 Pfam OTU-like cysteine protease 12 104 IPR003323 -
Lapu8g01309 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Lapu8g01309 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Lapu8g01309 208 Gene3D - 1 173 - -
Lapu8g01309 208 CDD OTU_plant_OTU1_2-like 3 166 - -
Lapu8g01309 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01309 1 208 C2H2 Transcription Factor Family AT1G50670 81.250 2.45e-129 361