Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01304 ATGCACTCACCAACTGCTTCTGCATTCCACCATTCGTCTCTGTCTCCAAACTCTCTTCACAAAACAGGTTTTTCTCCATTTTCTCGCACTATTCATATGGAGATGAGCGGAGTGGGGATTGATATTGGAAATGAGAATTGTGTGATTGCTGCAGTGAAGCAAGGTGGGATTGATGTTTTATTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTTTGCTTTGGAGAGAAGCAAAGGTTTTTAGGGTCAGCTGGTGCTGCTTCTGCTATGATGCACCCCAAGTCCGCAATATCTCAAGTGAAGAGACTAATAGGCAGGAGATTTGCGGACCCTGATGTTCAAAATGAGTTGAAAATGCTCCCTGTTGAAACCTCAGAAAGTGCAGATGGTGGCATTCTGATACACTTGAAATACTTGAAGGAGAGTCATGCGTTTACCCCGGTTCAAATAGTAGCAATGCTCTTTGCGCACTTGAAGACCATAGCTGAAAAAAATTTTGGGACCACCGTATCTGACTGTGTTATTGGGGTTCCATCGTACTTCACCAACTTGCAGAGACAAGCTTATCTCAACGCAGCAGCAATTGTTGGGCTGAAACCGTTGAGGTTGATCCATGATTGCACTGCAACTGCTCTTAGTTATGGAGTTTACAAAACAGATTTTGCTAGTGAAGCTCCAGTTTATGTTGCATTTGTTGACATAGGTCACTGTGATACTCAGGTCTCTATTGCAGCATTTCAGGCTGGTCAAATGAAGATACTCTCACATGCTTATGACAGGAGCTTAGGGGGAAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCTGCAAAATTTAATGAACAGTACAACATTGAAGTGTATTCTAATGTCAGGGCATGTAGGAGACTGCGTGTAGCATGTGAGAAGTTGAAGAAGGTTTTGAGTGCAAATCTAGAGGCTGATTTGAGCATTGAGTGTTTGATGGATGAAAAAGATGTTAAAGGCTATATCAAGAGGGAAGAATTTGAGAATCTAGCATCAGGTTTATTGGAGAGAATTTCTGTTCCTTGCAACAAAGCCTTGGCTGATGCAGCCTTGACAGTAGAAAAGATTAATTCTGTTGAGTTAGTTGGTTCAGGTTCTCGGATTCCAGCTATAACTAGAATATTAACTTCTGTATTTAAGAGAGAGCCCAGCCGCAGACTAAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTCCAGTGTGCAATGCTAAGTCCTGTTTTCCGTGTCAAAGAATATGAGGTCCAGGATTCTCTTCCTTTTTCCATTGGACTTTCATCTGATGGAAAGCCAGTTGGTGCAGGATTGAATGGTGTACTCTTCCCAAAAGGCCAACCCATTCCAAGTGTTAAAATTCTCACATTTCAGTACAGTGATTTACTCCGTTTGGAAGCATTCTATGCCAATCCAGATGAATTACCACCCAGGACATCTCCTAAAATTTGTTGCTTCACTATTGGTCCTTTCCATGGATCCCATGCAAGTAAGGCAAGAATTGAAGTTCAAGTTCAACTAAATTTACATGGCATTATCGGTATTGAATCAGTTACATTGGTTGAGGATCATATGGATGATTCCGTCACAACAGATGATTCTCATTCAAATTCTGAAAGAATCAATATTGAACCTGTTTCTGAGACAATTGAAAAAGCCTCAGAAGATAGTATCAATGAAGAGTGTGAAGCTCGTCATCATTCTGCTGATGGTACAAGAAAAGATAATGCTAACAGAAGGCTTCATGTACCAGTGAGTGAAATCATTTATGGTGCAATGACCAAGGCTGAGATATTGGAAGCTCAAGAAAAAGAAGTCCAGTTAGCCGATCAGGACAGAACTATTGAGCTAATCAAAGACAGGAAGAATTTGTTGGAGTCTTATATTTATGAAACAAGAAGTAAGCTCTTCAGCACATATCTAAGCTTTTCGAGTGAACATGAGAGGAAGGACATATCTAGGAGTCTGAAGGAGACTGAGGATTGGCTTTACGATGATGATGATGGTGATGAAACCGTAGATGCTTATTCCGCAAAACTAGAAAATCTGAAACAGCTGGTGGATCCAATTGAATATCGATATAAAGACACAGAAGCGAGACCAAAAGCTACAAGAGATTTGTTATGTTGCATTGTAGAGTATCGAATGTCAGCAGATTCTCTTCCACCCCAAGATAAAGAACTGGTCATAAATGAGTGCAATAAAGCAGAGCAGTGGCTAAGAGAGATGGGGCAGCAACAAGATCTTTACGCTAAAAACTCTGATCCAGTATTATTATCAATTGATATCGAGAGCAAGACAGAGGAGTTAAACTCAGTATGCCAGCAGATATTGAAATCCAACGGTTCTCCAATGCCAAGAGACAAGGGTGAAGACAAGCAGAATACCCCATGA 2418 0.4103 MHSPTASAFHHSSLSPNSLHKTGFSPFSRTIHMEMSGVGIDIGNENCVIAAVKQGGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMHPKSAISQVKRLIGRRFADPDVQNELKMLPVETSESADGGILIHLKYLKESHAFTPVQIVAMLFAHLKTIAEKNFGTTVSDCVIGVPSYFTNLQRQAYLNAAAIVGLKPLRLIHDCTATALSYGVYKTDFASEAPVYVAFVDIGHCDTQVSIAAFQAGQMKILSHAYDRSLGGRDFDEVLFSHFAAKFNEQYNIEVYSNVRACRRLRVACEKLKKVLSANLEADLSIECLMDEKDVKGYIKREEFENLASGLLERISVPCNKALADAALTVEKINSVELVGSGSRIPAITRILTSVFKREPSRRLNASECVARGCALQCAMLSPVFRVKEYEVQDSLPFSIGLSSDGKPVGAGLNGVLFPKGQPIPSVKILTFQYSDLLRLEAFYANPDELPPRTSPKICCFTIGPFHGSHASKARIEVQVQLNLHGIIGIESVTLVEDHMDDSVTTDDSHSNSERINIEPVSETIEKASEDSINEECEARHHSADGTRKDNANRRLHVPVSEIIYGAMTKAEILEAQEKEVQLADQDRTIELIKDRKNLLESYIYETRSKLFSTYLSFSSEHERKDISRSLKETEDWLYDDDDGDETVDAYSAKLENLKQLVDPIEYRYKDTEARPKATRDLLCCIVEYRMSADSLPPQDKELVINECNKAEQWLREMGQQQDLYAKNSDPVLLSIDIESKTEELNSVCQQILKSNGSPMPRDKGEDKQNTP* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01304 805 Pfam Hsp70 protein 38 702 IPR013126 GO:0005524|GO:0140662
Lapu8g01304 805 Gene3D - 601 714 IPR029048 -
Lapu8g01304 805 Gene3D Actin; Chain A, domain 4 264 347 - -
Lapu8g01304 805 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 421 583 IPR029047 -
Lapu8g01304 805 PANTHER HSC70CB, ISOFORM G-RELATED 35 794 - -
Lapu8g01304 805 FunFam Heat shock 70 kDa protein 4 137 228 - -
Lapu8g01304 805 CDD HSPA4_like_NDB 36 415 - -
Lapu8g01304 805 SUPERFAMILY Actin-like ATPase domain 226 415 IPR043129 -
Lapu8g01304 805 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 634 IPR029047 -
Lapu8g01304 805 Gene3D - 39 408 - -
Lapu8g01304 805 MobiDBLite consensus disorder prediction 535 586 - -
Lapu8g01304 805 FunFam Heat shock 70 kDa protein 4 601 712 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 174 194 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 366 382 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 64 76 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 422 441 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 506 522 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 36 49 - -
Lapu8g01304 805 PRINTS 70kDa heat shock protein signature 397 417 - -
Lapu8g01304 805 FunFam Heat shock 70 kDa protein 4 264 347 - -
Lapu8g01304 805 FunFam Heat shock 70 kDa protein 4 35 107 - -
Lapu8g01304 805 Gene3D - 220 394 - -
Lapu8g01304 805 FunFam Heat shock 70 kDa protein 4 72 147 - -
Lapu8g01304 805 SUPERFAMILY Actin-like ATPase domain 37 219 IPR043129 -
Lapu8g01304 805 Gene3D - 72 147 - -
Lapu8g01304 805 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 603 701 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01304 Lapu-Chr8 30448472 30454671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01304 38 469 Calmodulin-binding Proteins AT1G16030 33.638 3.86e-75 255