Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01293 ATGATATCTCCTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGATGTCCTTCAGATTGCATTTTCTCTCCATATTTCCCCGCCACTGATCCTCAAAGATTTGCTTCTGTTCACAAAATTTATGGTGGCAGCAATGTTGGTAAAATGCTTCAGCAAATACCACCACATTTACGTGAACAAACTGCAAATTCTTTACATTTTGAAGCACAATGCAGGATTCAAGACCCAGTTTATGGATGTGTTGGGATGATCTCAAGATTATATGATCAAATCCGCAATAAAGAAATTGAACTTGCCCAAGTTCAATCTCAGATTACCTGTCACAAGCTTCAACTCCAACAGACAAATAATGTTGAAACAAACTTGAATTTGTTATCAACAGTTGAAGCTGAATCCAGTTCTCAAATACCAGAACAAAGCAGCAATCCTAGAGAGTTTCAATGGCCAAATCATCTTTCTTGGTTTAATTAG 471 0.3737 MISPRCAACKNQRRRCPSDCIFSPYFPATDPQRFASVHKIYGGSNVGKMLQQIPPHLREQTANSLHFEAQCRIQDPVYGCVGMISRLYDQIRNKEIELAQVQSQITCHKLQLQQTNNVETNLNLLSTVEAESSSQIPEQSSNPREFQWPNHLSWFN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01293 156 Coils Coil 84 104 - -
Lapu8g01293 156 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Lapu8g01293 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 133 - -
Lapu8g01293 156 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01293 Lapu-Chr8 30395353 30395950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01293 5 119 AS2 family AT3G26660 57.391 1.22e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g01293 LOB 3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01293 - - ccaj:109810657 224.942