Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01275 ATGGAACCCTCTTCCAATCATGCCATTGCTAATCCTTCCTCACATCCAATCATGTCCTTTAGAGGGACTCCACTTCTAATGGATGCCCTTGATTTCTTCCCTCAGAAGACTAAAGAGATTGAAGATGACGACGACGACATTGATCATCATCAAACACTCCAGTTTCATGTAGATACCAGTTTGGATCTCCTTTCAAAGAATAGCGGTGGCAACAGATCAATCGAAGAAAATGATGCATTGGAAAATATGGATGACAAGAGCAAGTTTGTCGCTTTGGTAACTGAATTGCACCAAATGAATGCTGAAAATCAAAGATTAAGAGAGTTGGTTGATCAGATGAACAATAACTACAATGCCCTACGCATGCAACTTATCAAGCTAACGCAGACGCAGCATAACCAAGGGAACAATGGAGTGATTGGAGAGAAAGAAGACATGGTTCCAAGGTCATTCTTAGACATGGCTGTCGCTGAAAAGGATGAGGCTTCCCAGCAATCCTCAGAGGAAAAACACAGAGAAAGCAAAAGCGTGGTTGATTTGATGCATCAGTGTAAGGGTAATGACAAAGACATTGAAGATAAGTTGGATTGTGGAAGGGAGAGCTCAAAAGCTAGAATGGAAGGTGACCAAGAACTTTCTAACAAAGTTCCTAAATTGGATCAAACTTCAGAAACCTTGTCAATGATCAAGAAAGCTCGTGTGTCAGTTCGAGCAAGATCAGACTCAACAATGATTGCAGATGGATGCCAATGGCGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCTTGTCCAAGGGCCTATTATCGTTGCACAATGAGTACTGGTTGTCCAGTGCGCAAACAAGTACAAAGGTGTGCAGAAGATCGAAGTGTGCTGATCACTACATATGAAGGGCAGCATAACCATCCACTGCCTCCCACAGCTCAAGCAATGGCCTCCACCACATCTGCAGCTGCTTCAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCTAATCAATCCAACCATATTAGAAAGTGCTTCACTTCCCTGCTCCCAAAACATGGCAACTCTATCTGCCTCAGCCCCATTTCCCACCATCACACTGGATCTCACTCAAAATGCTACCAACTCCTCACAGCTACAAAGGGAACCACAGAACCAACTTAGCCTCCTCTCTCCCCTTTTGGCTCATAAGTTTATGTCAGTTCCAAAAATATTTGGACAGTCACTGTGTGATCAAACTAAGCTTGCTGGCTTACATGAGTCTCAGGGAATGGACACAGCTCCATCATTTGCTAACTCACTTAATGCAGCTACTGCTGCTATCACAGCAGACCCCAATTTCACTGCAGCTCTTGTCGCAGCTATAACATCTGTCATGGGGAGTTCACATTCAAACACCAGTGGCACCAGTAATACAACTGGGGATGACCAGTGCAATAATAATGCATAA 1443 0.4394 MEPSSNHAIANPSSHPIMSFRGTPLLMDALDFFPQKTKEIEDDDDDIDHHQTLQFHVDTSLDLLSKNSGGNRSIEENDALENMDDKSKFVALVTELHQMNAENQRLRELVDQMNNNYNALRMQLIKLTQTQHNQGNNGVIGEKEDMVPRSFLDMAVAEKDEASQQSSEEKHRESKSVVDLMHQCKGNDKDIEDKLDCGRESSKARMEGDQELSNKVPKLDQTSETLSMIKKARVSVRARSDSTMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINPTILESASLPCSQNMATLSASAPFPTITLDLTQNATNSSQLQREPQNQLSLLSPLLAHKFMSVPKIFGQSLCDQTKLAGLHESQGMDTAPSFANSLNAATAAITADPNFTAALVAAITSVMGSSHSNTSGTSNTTGDDQCNNNA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01275 480 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01275 480 Coils Coil 96 130 - -
Lapu8g01275 480 MobiDBLite consensus disorder prediction 158 183 - -
Lapu8g01275 480 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01275 480 MobiDBLite consensus disorder prediction 162 183 - -
Lapu8g01275 480 MobiDBLite consensus disorder prediction 458 480 - -
Lapu8g01275 480 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01275 480 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01275 480 FunFam probable WRKY transcription factor 31 230 307 - -
Lapu8g01275 480 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01275 480 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 75 467 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01275 Lapu-Chr8 30232100 30235027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01275 30 466 WRKY Transcription Factor Family AT1G62300 46.667 3.94e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g01275 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01275 - - vum:124848283 753.436