Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01264 ATGTGGTTGCAGGTGGCATTACTTTCAAGAATGTATAAATTTTTCGATGCGGGAAGCGAACCAATTGAACAAGCAAATGCAGCAAGAGTACATGGAGACAAACATTTCTTCTATAACTGTAGTTTTGTAGGTTATCAAGACACTTTATATGATCAATATGGACGTCATTACTTTAAAGATTGTTACATTCAAGGTGAAGTTGACTTTATATATGGTAGTGGACAATCTTACTATGAGAACTGTTTGATGAATGCTGTGGGGAGAAATTCAGATTTAGCAGGGTTTGTGACAGCTCAGGGACGAAGTTCATCAGATGACCCAGATGGTTTTGTATTTGAAGGAGGTTCCCTTGTAGGGAATGGCAAAGTGAATTTAGGAAGAGCATGGAGTCCTTATTCCAGAGTCATATTTCATAAAACATGTTTTTCTTCCATTGTTACTCCTCAAGGATGGAGTGCTTGGCATTATGCAGGCAATGAGTAA 483 0.381 MWLQVALLSRMYKFFDAGSEPIEQANAARVHGDKHFFYNCSFVGYQDTLYDQYGRHYFKDCYIQGEVDFIYGSGQSYYENCLMNAVGRNSDLAGFVTAQGRSSSDDPDGFVFEGGSLVGNGKVNLGRAWSPYSRVIFHKTCFSSIVTPQGWSAWHYAGNE* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01264 160 Gene3D - 14 160 IPR012334 -
Lapu8g01264 160 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 159 - -
Lapu8g01264 160 Pfam Pectinesterase 18 155 IPR000070 GO:0030599|GO:0042545
Lapu8g01264 160 SUPERFAMILY Pectin lyase-like 23 156 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01264 Lapu-Chr8 30159905 30160743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01264 17 160 Carbohydrate Esterase AT2G19150 46.939 5.92e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01264 - - var:108336510 278.87