Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01261 ATGAGTTTTCTTCTTATCTTGTTCATTAGTTGTTTCTTTTATCTTGGTAAAGCCACCGATTGTGGTGGAAAGAAGGTTACACAAACTATCATTGTTGGTAAAGAAGGTGAAGCAGCATTCAGAACAATTCAAGAGGCCATTAATTCTAACTCATATAATGTGGCGAATAAAATACATAAATCGAACAATGTGGGAAGCGAACCAATTGAACCAGCAAACGCAGCAAGAATATACGGAGACAAATCTTTCTTCTATAATTGTAGTTTTGTAGGTTATCAAGACACTTTATTTGATGCATTCGGACGTCATTACTTTAAAGATTGTTACATTCAGGGTGAAGTCGACTTTATATTTGGTGATGCACAATCTTATTATGAGAACTGTAACATCAATGCTGTAGGAAGAAATCCAGATTTAGCAGGGTTTGTGACAGCTCAAGGACGAAGTTCATCAGATGATCCTGGTGGGTTTGTATTTGAAGGAGGTTCCCTAACAGGGAATGGTAAAGTGAATTTAGGAAGAGCATGGGGCAATTACTCAAGAGTCATATTTCATAAAACATATTTTTCTTCCATTGTTACTCCTGAAGGGTGGAATGCTATGGGATCCGTTGGCAATGAGAGTAGACTCAGTTATGCTGAAGTTGAGTGTGAAGGGCCAGGAGCTGATACTTCAAAGCGTGTTCCATGGTTGAAGAAACTAAGTCCTTCAGATTTGCAACAATTCTCTTTCGCATCTTTTATCAATAAAGATGGATGGGTTGATAACTTACCAATCATGTTCTAA 786 0.3753 MSFLLILFISCFFYLGKATDCGGKKVTQTIIVGKEGEAAFRTIQEAINSNSYNVANKIHKSNNVGSEPIEPANAARIYGDKSFFYNCSFVGYQDTLFDAFGRHYFKDCYIQGEVDFIFGDAQSYYENCNINAVGRNPDLAGFVTAQGRSSSDDPGGFVFEGGSLTGNGKVNLGRAWGNYSRVIFHKTYFSSIVTPEGWNAMGSVGNESRLSYAEVECEGPGADTSKRVPWLKKLSPSDLQQFSFASFINKDGWVDNLPIMF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01261 261 SUPERFAMILY Pectin lyase-like 28 258 IPR011050 -
Lapu8g01261 261 Pfam Pectinesterase 26 250 IPR000070 GO:0030599|GO:0042545
Lapu8g01261 261 Gene3D - 50 261 IPR012334 -
Lapu8g01261 261 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01261 Lapu-Chr8 30145310 30147122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01261 46 254 Carbohydrate Esterase AT1G05310 44.860 1.54e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01261 - - var:108336510 336.265