Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01260 ATGGAATCGTTTCCTCGTCCTATGACTTTCCTCCTGCTCTTAGTTACTAGTTCTTTCTTTTCCGCCGGTAAAGCCGTAGATTGTGGTGGAAAAGATATTTCAAAAACCATAACAGTTGATCCAAATGGGAAAGAAGCATTTAGAACAATTCAAGATGCCATTAACTCAGTAAAGAGCAACAATGATGAATGGGTCAAGATTTACATCAAGGCTGGCTCATATAAAGAAAAGCCTCAGATTCCCATAGAAAAGCCATGCATAATTTTACAAGGAGAAGGTAGCTCAAACACAACCGTAAGCTTTTCAGACCACAACGGAACAGGTGACAGTGCTACCTTCACTTCATCGCCACCCAATGTTATTCTCACTGGCATTACTTTCAAGAACTTATATAGTAATTCTCCAGCACTGGCAGCAAGAATATACGGAGACAAATCTTTCATCTATAACTGCAGTTTTACTGGTTATCAAGACACTTTGTTTGATGCTAATGGACGCCATTACTACAAAAATTGTTACATTGAAGGTGAAATAGACTTTATTTATGGTGATGCACAATCTTATTATGAGAACTGTAACATCAATGCTGTAGGGAGAAATCCAGATTTAGCAGGGTTTGTGACAGCTCAGGGACGAAGTTCATCAGATGATCCTGGTGGGTTTGTATTCGAAGGAGGTTCCATAACAGGGAATGGTAAAGTGAATTTAGGAAGAGCATGGCGACCTTACTCAAGAGTCATATTTCATAAAACATATTTTTCTTCCATTGTTACTCCTCAAGGATGGTTTGCTTGGACTGCCACTGGGAACGAGAGTAGACTCAGTTATGCTGAAGTTGAGTGTGAAGGACCAGGAGCTGATACTTCAAAGCGTGTTCCATGGTTGAAGAAACCAAGTGTTTCAGACATGGAACAATTTTCTTTCACATCTTATATCAATAAAGATGGATGGGTTGATAACTTACCAACCATATCTTAG 978 0.3926 MESFPRPMTFLLLLVTSSFFSAGKAVDCGGKDISKTITVDPNGKEAFRTIQDAINSVKSNNDEWVKIYIKAGSYKEKPQIPIEKPCIILQGEGSSNTTVSFSDHNGTGDSATFTSSPPNVILTGITFKNLYSNSPALAARIYGDKSFIYNCSFTGYQDTLFDANGRHYYKNCYIEGEIDFIYGDAQSYYENCNINAVGRNPDLAGFVTAQGRSSSDDPGGFVFEGGSITGNGKVNLGRAWRPYSRVIFHKTYFSSIVTPQGWFAWTATGNESRLSYAEVECEGPGADTSKRVPWLKKPSVSDMEQFSFTSYINKDGWVDNLPTIS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01260 325 FunFam Pectinesterase 31 322 - -
Lapu8g01260 325 Gene3D - 30 323 IPR012334 -
Lapu8g01260 325 SUPERFAMILY Pectin lyase-like 34 321 IPR011050 -
Lapu8g01260 325 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 319 - -
Lapu8g01260 325 ProSitePatterns Pectinesterase signature 1. 61 80 IPR018040 -
Lapu8g01260 325 Pfam Pectinesterase 37 312 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01260 Lapu-Chr8 30140928 30143004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01260 10 271 Carbohydrate Esterase AT2G19150 47.059 1.22e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01260 - - pvu:PHAVU_008G271600g 479.944