Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01259 ATGATTTTCCTCCTGGTCTTAGTTACCAGTTCTTTCTTTTGCCTGGGTAAAGCCATAGATTGTGGTGGAAAAGATATTTCAAAAACCATAACTGTTGATCCAACTGGGAAAGAAGCGTTTACAACAATTCAAGATGCCATTAATTCAGTAAAGAGCAACAATGATGAATGGGTCAAGATTTACATCAAGGCTGGTTTATATAAAGAAAAGCTTCAGATTCCGACAGAAAAGCCATGCATAATTTTACAAGGAGAAGGTAGCTCAAACACAATCGTAAGCTTTTCAGACCACAACGGAACAGCTGATAGTGCTACCTTCACTTCAGCGCCACCCAATGTTTTTGTCGCTGGCATTACTTTCAAGAACTTATATAGTTATTCACCAGCATTGGCAGCAGGAATATCCGGAGACAAATCTTTCTTCTATAATTGTAGTTTTACTGGTTATCAAGACACTCTGTTTGATGCTAATGGACGCCATTACTTCAAAGATTGTTACATTGAAGGTGAAATAGACTTCATTTACGGTGATGCACAATCTTATTATGAGAACTGTAAGATCAATGTTGTAGGGAGAAGTCCAAGGTTACCAGGCTATGTCACAGCTCAAGGAAGAAGTTCATCAGATGATTCAGGTGGTTTTGTGTTTGAAGGAGGTTCCATTACAGGGAAGGGTAAAGTGCATTTAGGAAGAGCATGGCGACCCTATTCCAGAGTCATATTTCATAAAACATATATTTCTTCCATTGTTACTCCTCAAGGATGGCTTGCTTGGACTGCCACTGGCAATGAGAACGCGACCACTTATGCTGAAGTTGAGTGTGAAGGACCAGGAGCTGATACTTCAAAGCGTGTTCCATGGATGAAGAAACTAAGTCCTTCAGATTTGCAACAATTCTCTTTCGCATCTTTTATCAATAGAGATGGATGGGTTGACAATTTACCAATAATATCCTAA 957 0.3929 MIFLLVLVTSSFFCLGKAIDCGGKDISKTITVDPTGKEAFTTIQDAINSVKSNNDEWVKIYIKAGLYKEKLQIPTEKPCIILQGEGSSNTIVSFSDHNGTADSATFTSAPPNVFVAGITFKNLYSYSPALAAGISGDKSFFYNCSFTGYQDTLFDANGRHYFKDCYIEGEIDFIYGDAQSYYENCKINVVGRSPRLPGYVTAQGRSSSDDSGGFVFEGGSITGKGKVHLGRAWRPYSRVIFHKTYISSIVTPQGWLAWTATGNENATTYAEVECEGPGADTSKRVPWMKKLSPSDLQQFSFASFINRDGWVDNLPIIS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01259 318 Pfam Pectinesterase 30 306 IPR000070 GO:0030599|GO:0042545
Lapu8g01259 318 Gene3D - 23 317 IPR012334 -
Lapu8g01259 318 SUPERFAMILY Pectin lyase-like 27 314 IPR011050 -
Lapu8g01259 318 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 312 - -
Lapu8g01259 318 FunFam Pectinesterase 24 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01259 Lapu-Chr8 30136381 30138348 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01259 3 264 Carbohydrate Esterase AT2G19150 45.221 1.81e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01259 - - pvu:PHAVU_008G271600g 473.781