Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01257 ATGGATTGTATGGGAAACAAAATCGTACACACCATCGTTGTTGATCAGCAAGGTAAAGGAGATTTCACAACAGTTCAAGCTGCTATTGATTCCATCAAGGAGAACAATGATCAATGGGTCAAAATTCACATAAATCCTGGAAAATACATAGAGAAAGTTATAATTTCAGAAGATAAAGCATGCATATTTTTAGAAGGCCAGGGTAGAGAGGTAACCACCATTACATCAAGTGGGCACCACCGCACTACGGCCACAGTTACATCAATTGATTACAAACTAAACGACCACTTGGGTGCTACATTTGTTTCTGTTCCCTCCAATGTAATTGTTATTGGCATTACCTTCCAGAATTCGTATAATCTGGTGGGGTCAGAACCCATTCAACCTGCACCAGCAGCAGCCATATATGGTGACAAATCTGTCTTCTTTAAGTGTGGTTTCGTGAGTTACCAAGATACTCTCTTTGATGCAAAGGATCGTCATTATTTTAAAGATTGTTACATTGAAGGTGAAGTTGACTTCATTTATGGCAGTGGTCTATCTTACTACGAGGATTGTACCATTAATGCTACCCTTGGAAAATCTCCTCCAGGTTTTGTAACAGCTCAATCGAGAGGATCAGAAGATCATAAGAGTGGTTTTGTGTTTAGAGCAGGTTGTGTAATTGGAAATGGTAAAGTGAACCTTGGAAGAGCTTATGGACCTTACTCAAGAGTTATATTTCATGGAACTTATTTATCTTCAGTAGTATCACCTGAAGGGTGGAATGCTTGGGGCTACGTTGGCCAAGAGTAG 795 0.3975 MDCMGNKIVHTIVVDQQGKGDFTTVQAAIDSIKENNDQWVKIHINPGKYIEKVIISEDKACIFLEGQGREVTTITSSGHHRTTATVTSIDYKLNDHLGATFVSVPSNVIVIGITFQNSYNLVGSEPIQPAPAAAIYGDKSVFFKCGFVSYQDTLFDAKDRHYFKDCYIEGEVDFIYGSGLSYYEDCTINATLGKSPPGFVTAQSRGSEDHKSGFVFRAGCVIGNGKVNLGRAYGPYSRVIFHGTYLSSVVSPEGWNAWGYVGQE* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01257 264 Pfam Pectinesterase 12 258 IPR000070 GO:0030599|GO:0042545
Lapu8g01257 264 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 262 - -
Lapu8g01257 264 SUPERFAMILY Pectin lyase-like 11 259 IPR011050 -
Lapu8g01257 264 Gene3D - 3 264 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01257 Lapu-Chr8 30126889 30128628 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01257 2 264 Carbohydrate Esterase AT2G19150 43.657 3.56e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01257 - - gmx:100803932 410.994