Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01238 ATGCCGAACCAAGATATTTGCAGTTACCTTAAAGAGCCTCGTCTTGTAGCCAGGAAGTTCTTGGCCAGACCTCAACATGAGGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGAACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTCACTGCTCCTGCTGGGTTTCCTGATCACCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGAGCTGTAACACATGAAGATTTTGAAGGACGCAAGGGAACAATTGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGAATAGTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTTCAGCTGTGGATCAATCTCTCTTCAAAACATAAAATGATGGAGCCAAGGTACCAAGAAATGCTGAGCAAGGACATAGCTGAAACTATGATAGATGGAATCAAAGTTAGAGTGATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGAACACCAACCATGTACTTGGATTTTTCCCTTAAACCTGGTGCTCACTTGCAGCAACTTATACCAAAATCTTGGAATGCTTTTGTGTACATATTGGAAGGAGAGGGTGTTTTTGGGAACCAAAAGTCTCAACCTGTGTCTTCTCATCATATACTTCTACTTGGTTCTGGGGATGGACTTGAGGCATGGAACAAATCTTCTAAGGTTCTTAGGTTCATTTTGGTTGGAGGGGAACCATTGGGGGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGATCAAACAATTGATGATTTTGAGAATTTTACCAACGGATTTGAGAAAGCAAGACACTGGAGGTCTGAAAGTGCACTTAGCCTTGATTATTGA 906 0.4316 MPNQDICSYLKEPRLVARKFLARPQHEGVGAVVRRSIGRFELKNFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGRKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMMEPRYQEMLSKDIAETMIDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQLIPKSWNAFVYILEGEGVFGNQKSQPVSSHHILLLGSGDGLEAWNKSSKVLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENFTNGFEKARHWRSESALSLDY* 302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01238 301 CDD cupin_pirin_C 176 252 - -
Lapu8g01238 301 PANTHER PIRIN-RELATED 10 295 IPR012093 -
Lapu8g01238 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Lapu8g01238 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Lapu8g01238 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Lapu8g01238 301 CDD cupin_pirin_N 31 128 - -
Lapu8g01238 301 FunFam pirin 27 165 - -
Lapu8g01238 301 PIRSF Pirin 12 292 IPR012093 -
Lapu8g01238 301 Pfam Pirin 33 126 IPR003829 -
Lapu8g01238 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu8g01238 Lapu-Chr8 29981230 29984453 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01238 13 289 Calmodulin-binding Proteins AT3G59220 59.140 4.25e-124 354