Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01232 ATGCAGAACACAAGAGATTTTTCTATGTTGAGGCTATTTTTCTTAGCTATCATTTTCTTTATCATAGAATGTACAAGAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCTTAAGGGCCGTTGATCCTGAAAACGTGCTTAATAACACTACATGGATTGGATCACCATCACATTCGTGCTTGGTCAAGTTGAATGGTGTAAGATGTGACTCAAATGCTACTAATATTGTACATATAAGGCTTGAGAACTTGAACCTTAGTGGCACAATTGATGCAGATTCCCTATGCAGGCTCCAAAAGTTAAGAGTGGTGAGCTTGGCTAACAACAACATCAGAGGAACCATTCCACCTTCAATTTTGCATTGTACAAGGTTGACACATTTAAATTTAACCAGCAACCAACTGAGTGGGAAGTTGCCAAAGGCCTTAACAAAATTGAAGCATCTAAGGAACTTAGACATCTCTAATAACAACTTTTCTGGTATGATCCCTAGTAAACAACAATATAGGCGACTATTTACTTATTATGTGACACCAAGTAATAAGTTGGAAGACAATAGTACCTATGAGGGGCTAAAAGAAAGTGACACAAACACAATGCAGCTACCAACATCAGATTCTTTACGAGACACTGCTTCTGGTAATGTCAATAGTTCACGGAATTGGAAGATAGGAACTTTGGTGGTGTTACTTTTAGGCACTGGAGTGCTTTTGTCATCCTTTTACTTTATGGTAAAGAAGGTATCAAAGTTAAATGAAGGGAGAGAGGTAGTAAAAGAGAATCATGATGTGTTAAAGGCTCCACCTAAAGAAGTTCAAGAGGTGAACCTAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAAAGGTTCACGCTGGAGGATCTTCTTCGAGCCACTGCTGATTTGAGGAGTGAAGGCTTCTGCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATGTTCACTATGCAGTTAAAAGATTGAAGAATTTGCAGGTTTCCTTGGAAGAATTTGGTGAAACATTGAGGAAGATTAGTAACTTGAAGCATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAGTTCATCATTTACAAATATCAAAACAATGGAAGCCTGCTTAATCTGTTAAACGATTATATAGCAGGTAGAAAAGATTTCCCATGGAAACTGCGTCTGAATATAGCATGTGGAATTGCAAGGGGTTTGGCCTTCATATATAGGAAGTTGGATGAACAGGAAGAGGTCATTCCTCATGGAAATCTGAAGCCATCAAACATCCTTCTAGATGAGAACAACGAGCCACTAATAAGTGAGCATGGTTTATCAAAATTCATGGACCCAAATAGAGGTTTTCTCTTTTCCTCTCAGGGATACACAGCTCCAGAAAAGAGCCTAACAGAAAAGGGTGATGTGTACAGCTTTGGAGTGATTCTGCTTGAACTACTAACAGGAAAAAGCATAGAGGTGAGCAGAATAGACCTTGCTAGATGGGTGAGGTCCATGGTGAGGGAGGAATGGACAGGAGAAGTCTTTGACAAGGAAGTTAGGGAGAATGAGCATCAATGGGCATTTCCTCTTCTGAACATAGCCCTCTTGTGTGTGTCACGTTTCCAAGAAAATAGGCCAACCACCGTGGAGATTTTAGAGAAGATAGAAGAGGTCATGGATCAACATGAACAATATCAGGATCGTTTTGCTTCCAGATGCTGTTCCAATGGATCCAACCGTGATGAGTGTTGTTCACTTCACAAAATCATACCTGAAACATGGGATTCTCCAGGATCAAATTATTGA 1824 0.3969 MQNTRDFSMLRLFFLAIIFFIIECTRGELSESESFFNFLRAVDPENVLNNTTWIGSPSHSCLVKLNGVRCDSNATNIVHIRLENLNLSGTIDADSLCRLQKLRVVSLANNNIRGTIPPSILHCTRLTHLNLTSNQLSGKLPKALTKLKHLRNLDISNNNFSGMIPSKQQYRRLFTYYVTPSNKLEDNSTYEGLKESDTNTMQLPTSDSLRDTASGNVNSSRNWKIGTLVVLLLGTGVLLSSFYFMVKKVSKLNEGREVVKENHDVLKAPPKEVQEVNLKEGDSELVFFVEDRERFTLEDLLRATADLRSEGFCSSLYKVKLENNVHYAVKRLKNLQVSLEEFGETLRKISNLKHQNILPLVGYRSTSEEKFIIYKYQNNGSLLNLLNDYIAGRKDFPWKLRLNIACGIARGLAFIYRKLDEQEEVIPHGNLKPSNILLDENNEPLISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSIEVSRIDLARWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALLCVSRFQENRPTTVEILEKIEEVMDQHEQYQDRFASRCCSNGSNRDECCSLHKIIPETWDSPGSNY* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01232 607 MobiDBLite consensus disorder prediction 188 213 - -
Lapu8g01232 607 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
Lapu8g01232 607 PANTHER OS05G0588300 PROTEIN 11 570 - -
Lapu8g01232 607 Pfam Protein kinase domain 311 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01232 607 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Lapu8g01232 607 FunFam Leucine-rich repeat receptor protein kinase EMS1 93 189 - -
Lapu8g01232 607 SUPERFAMILY L domain-like 42 167 - -
Lapu8g01232 607 Gene3D Ribonuclease Inhibitor 32 199 IPR032675 -
Lapu8g01232 607 Gene3D Phosphorylase Kinase; domain 1 270 376 - -
Lapu8g01232 607 ProSiteProfiles Protein kinase domain profile. 302 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01232 607 SUPERFAMILY Protein kinase-like (PK-like) 296 561 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01232 Lapu-Chr8 29941446 29943766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01232 12 564 Receptor kinase-like Gene Family AT5G53320 32.642 7.38e-82 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g01232 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01232 - - vra:106763201 1050.43