Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01231 ATGCCGTTGGTTAACCCTGACCCATTAGACAAAGATTCTGAGCCATTTGTGGAGACAGATCCAACTGGTCGCTATGGTAGATACAGTGAGTTACTTGGGTGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAGGAAGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAATTTCTGTGATGACCCTACCATGGTGGATAGGCTTTACTCTGAAGTGAGGTTGCTCAGAAGCTTGGCCAACAAAAACATCATTGCACTTTACAGTGTGTGGAGGGATGACCAGCGTAACACTCTGAATTTCATCACTGAGGTTTGTACCAGTGGTGATTTGAGGGAGTACAGGAAGAGGCACAGGCATGTTTCCATGAAGGCCCTCAAAAAGTGGTCTAAGCAGATTTTGAAAGGGCTGAATTATCTGCACTTGCATGATCCCTGCATCATTCACAGGGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAGCCATTGTGCTCACACGATTCTTGGCACGCCAGAATTCATGGCTCCGGAGTTATATGATGAAGACTACACAGAGTTGGTGGACATTTATTCATTTGGCATGTGTGTGCTAGAAATGGTGACACTGGAGATTCCTTATAGTGAATGTGACAATGTTGCAAAGATATACAAGAAGGTGTGTTCTGGAGTTAGACCTGCAGCCTTGAACAAGGTCAAAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGAGCCAGACCTTGTGCAGCTGACCTTCTCAAAGATCCCTTCTTTGATGAGATTGTTGATGATGACGAAAATGATGACTGTGCTTGTTCTTACCACCAGGGGAGGGTTTGA 918 0.4575 MPLVNPDPLDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPTMVDRLYSEVRLLRSLANKNIIALYSVWRDDQRNTLNFITEVCTSGDLREYRKRHRHVSMKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVCSGVRPAALNKVKDPEVKAFIEKCLAQPRARPCAADLLKDPFFDEIVDDDENDDCACSYHQGRV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01231 305 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01231 305 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Lapu8g01231 305 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Lapu8g01231 305 MobiDBLite consensus disorder prediction 1 21 - -
Lapu8g01231 305 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Lapu8g01231 305 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Lapu8g01231 305 CDD STKc_WNK 24 284 - -
Lapu8g01231 305 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 287 - -
Lapu8g01231 305 SUPERFAMILY Protein kinase-like (PK-like) 20 291 IPR011009 -
Lapu8g01231 305 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01231 Lapu-Chr8 29935358 29937991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01231 5 288 MAP Kinase Kinase Kinase AT5G55560 80.986 5.58e-179 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu8g01231 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01231 K08867 - gmx:100786910 567.77