Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01227 ATGCAAATGTCTCAGAAACATAAAATTTCCTATGAGCCTGTCCAAAATCTTGGGTCTTGCTGCTTCCTACAAAGGGAGAACCTAGACTACTATTCATCCTCTGATAACAGTGGCCATGCAACCTATCCTTCTGTTCGTACTTTAGAACAATATTGCACCCTGGAGTCTTCTACAAAGAACAGTTTCCCTTCCCTAAATTCCCCATCTACTGTCAGTTTCTCACCTAACAACAGCCCAGTCTCAAAGCTACAGCCGAAATCATACGTGTTGAGTTCACAGAATTCACTTGAAATTGCTAATGATTCACTAGAAAATGAATCATGTTTGACGCATAATGACAATGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTATGTTGGGACATGATGCAGATATTCTGGATATGTATGATACTGTAATTCCAGAGGAATCTGATTCATTTTTGCTAGAGGCAGAAAGGTGGAAGAAAATGATGGAAATGATATCTAGAGGAGATTTGAAAGAGATGCTTTGTACATGCGCAATGGCAGTGGCAGGAAATGATATGGAGACAACTGAATGGTTAATGTCAGAGTTACGCAAAATGGTTTCAGTTTCGGGCAACCCAATCCAACGAATGGGGGCATACATGCTGGAGGCTCTTGTTGCAAGACTGGCCTCTTCAGGAAGCACAATCTACAAAGCCTTGAAATGTAAAGAGCCTACTGGCAGGGAACTCCTTTCACACATGCACCTACTTTATGAAATATGCCCATATCTCAAATTTGGGTACATGTCAGCAAATGGAGCTATTGCTGAAGTCATGAAGGAGGAAAGTGAAATCCACATAATTGATTTTCAGATCAACCAGGGAATACAATGGGTTAGCCTAATCAAAGCTCTTGCTGGCAGACTTGGAGGACCCCCCAAGATCAGAATAACAGGTTTCGATGACTCCACTTCAGCTTATGCCAGGGAAGGAGGCCTTGAAATCGTGGGAGAAAGGTTGTCAACAATTGCACAATCATATAATGTACCCTTTGAGTTCCATGCCATAGAAGTTGCTCCCACTGAGGTTGAAATTAAAGACCTTGAACTTCGACCCGGTGAAGCTATTGCTGTCAATTTTGCCATGATGCTGCACCATCTCCCGGATGAAAGTGTGGATAGTCAGAACCATCGTGACCGGTTGTTGAGATTGGCAAAGTGCTTGTCTCCAAAGATCGTGGCACTAGTTGAGCAAGAATCCCATACCAGCAACCTCCCATTCTTCCCCCGTTTTGTTGAGACAATGAACTACTACTTGTCTATTTTTGAATCTATTGATGTTGCTCTTCCAAGGGATAACAAGGAAAGGATTAACGTGGAACAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAGTAGCTTGTGAAGGGGCAGAAAGAGTGGAACGTCACGAGCTTCTGAAGAAATGGAGATCACGTTTCGCTATGGCTGGATTCTCACCATATCCATTGAACTCCTTTATAACTTCTTCGATTAAAAATCTTCAGCAAAGCTACCAAGGACATTACACTCTAGAAGAGAGAGACGGAGCTCTATGTCTTGGTTGGATGAATCAAGTTCTTATTACTTCTTGTGCTTGGAGGTGA 1617 0.4255 MQMSQKHKISYEPVQNLGSCCFLQRENLDYYSSSDNSGHATYPSVRTLEQYCTLESSTKNSFPSLNSPSTVSFSPNNSPVSKLQPKSYVLSSQNSLEIANDSLENESCLTHNDNELRHKIRELESAMLGHDADILDMYDTVIPEESDSFLLEAERWKKMMEMISRGDLKEMLCTCAMAVAGNDMETTEWLMSELRKMVSVSGNPIQRMGAYMLEALVARLASSGSTIYKALKCKEPTGRELLSHMHLLYEICPYLKFGYMSANGAIAEVMKEESEIHIIDFQINQGIQWVSLIKALAGRLGGPPKIRITGFDDSTSAYAREGGLEIVGERLSTIAQSYNVPFEFHAIEVAPTEVEIKDLELRPGEAIAVNFAMMLHHLPDESVDSQNHRDRLLRLAKCLSPKIVALVEQESHTSNLPFFPRFVETMNYYLSIFESIDVALPRDNKERINVEQHCLAREVVNLVACEGAERVERHELLKKWRSRFAMAGFSPYPLNSFITSSIKNLQQSYQGHYTLEERDGALCLGWMNQVLITSCAWR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01227 538 ProSiteProfiles GRAS family profile. 159 538 IPR005202 -
Lapu8g01227 538 MobiDBLite consensus disorder prediction 59 80 - -
Lapu8g01227 538 Pfam GRAS domain family 169 538 IPR005202 -
Lapu8g01227 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 532 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01227 Lapu-Chr8 29910168 29911784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01227 44 538 GRAS Transcription Factor Family AT1G50600 59.481 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu8g01227 GRAS 1.7e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01227 - - gmx:100779977 969.918