Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01225 ATGGCTGCTTCTATGTCTCTCTATCCCTATAATCCCCTGCTATACTTTTCAACTCCTTCGTGTTTTCGTTCTCAATTTCGGAACTTGGAGAGAGGGCATTTGGGTTCTGCAAGGTCGAAGAGTTTAGTGAAACTTGCAGCACATTCAAATCCGAATATTCTCAAGACCAACAGGAAGTCCAAGTATCGGGAGGCACTGTCGCTGTATGATAGTGATGACGAAATGGACGAGGACGACGACGAAGATGATGAAGATAATGATTGGCTTTCTGATGAGGAATTTGCTGAGCCTGCTAAATTTGATGTTAGTAACAAGAGATTTAAGTCGAAGACAGTTAAAGGAAAAGATAAAGAGCAGGAGTGGGAGTGGGGTTTGAGATCTTTGGACAATGAACAAAGCATTAGATTGCCTAGAAGTGAAAGAGTGGCATCCTTACAACGAAATGAGAGTGGAAAGGTACCAAATACGGTTAGTAGAAATGTAAAGAATAAAAAATATCCGCGGTTGTCCGAAGAGATTCCTTTGGATTTGAAATGGTTACCACTTCTTGATTACTTAAGCACCTTTGGCATGAAGGAATCACACTTTATCCAAATATACGAGAGGCACATGCAAGCACTTCAAATTAATGTTGGTTCTGCACAGGAAAGGTTAGAATACTTAATGAGTGTCGGTGTTAAACATAGAGATGTAAGAAAAATCCTTTTGAGGCAGCCTCAAATTCTTGAGTATACAGTGGACAACAATCTGAAGTCCCGAGTTGGTTTCTTGAGGGGCCTCGGCATACCGAATTCTAGAATAGGGCAAATCATTGCTGCTGCTCCATCCTTGTTTTCTTACAGTGTTGAGAATTCATTGAAACCTACAGTTAGATATTTAGTTGAGGAAGTAGGCATCAAAGAAAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAAAGAATTGACATTTCATGGAATATGCGTTATATGTTCCTTACCAAGGAGTTGGGTGCACCCAGGGATAGCATTGTGAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATTGGAATGAAAAATTCAGATATCTTGAAAGTATTGACTAGCCTTACACAGGTGCTATCTCTGTCCTTGGAGGAAAATCTAAAGCCCAAATATTTGTACTTGGTTAATGAGCTTAACAATGAGGTGCAATCCTTGACCAAGTACCCAATGTATCTTAGTTTATCCTTGGACCAGAGAATCCGTCCTCGTCATAGGTTCTTAGTTTCCCTAAAGAAAGCTCCAAAAGGACCGTTTCCCCTTGGATCTCTTGTACCAACTGATGAATCCTTTTGCCAACAGTGGGCTGGAACAAGTTTGGATAAATATTTGGCATTCCGTCAAAGATTATTACTTCAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1476 0.3991 MAASMSLYPYNPLLYFSTPSCFRSQFRNLERGHLGSARSKSLVKLAAHSNPNILKTNRKSKYREALSLYDSDDEMDEDDDEDDEDNDWLSDEEFAEPAKFDVSNKRFKSKTVKGKDKEQEWEWGLRSLDNEQSIRLPRSERVASLQRNESGKVPNTVSRNVKNKKYPRLSEEIPLDLKWLPLLDYLSTFGMKESHFIQIYERHMQALQINVGSAQERLEYLMSVGVKHRDVRKILLRQPQILEYTVDNNLKSRVGFLRGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNMRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDESFCQQWAGTSLDKYLAFRQRLLLQKFAEKYERKM* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01225 491 MobiDBLite consensus disorder prediction 70 88 - -
Lapu8g01225 491 PANTHER CGI-12 PROTEIN-RELATED 181 463 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 Gene3D Transcription termination factor 3, mitochondrial 246 478 IPR038538 -
Lapu8g01225 491 Coils Coil 197 217 - -
Lapu8g01225 491 MobiDBLite consensus disorder prediction 68 88 - -
Lapu8g01225 491 FunFam Transcription termination factor MTERF9, chloroplastic 243 478 - -
Lapu8g01225 491 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 SMART mt_12 378 410 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 SMART mt_12 305 337 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 SMART mt_12 342 373 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 SMART mt_12 268 300 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 Pfam mTERF 184 257 IPR003690 GO:0003690|GO:0006355
Lapu8g01225 491 Pfam mTERF 246 439 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu8g01225 mTERF 2.1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01225 K15032 - gmx:100809638 812.372